Factsheet for Solyc01g108190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
cytosol 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400066610	Potato	plastid	95.68	95.68
VIT_03s0063g00530.t01	Wine grape	cytosol	62.7	63.74
KRH50269	Soybean	mitochondrion	60.0	60.0
KRH71148	Soybean	cytosol	57.84	57.84
Solyc02g065000.1.1	Tomato	cytosol	48.11	51.45
AT2G15680.1	Thale cress	plastid	51.35	50.8
CDY66855	Canola	plastid	51.89	50.79
Bra039845.1-P	Field mustard	plastid	51.35	50.26
CDY37233	Canola	plastid	51.35	50.26
HORVU5Hr1G068490.1	Barley	cytosol	22.7	48.84
EER96860	Sorghum	cytosol, mitochondrion	42.7	42.93
Solyc02g063350.1.1	Tomato	cytosol	33.51	42.76
GSMUA_Achr9P27060_001	Banana	plastid	43.78	41.12
Os09t0458700-01	Rice	cytosol, mitochondrion	41.08	41.08
Solyc02g091500.1.1	Tomato	cytosol	34.59	41.03
TraesCS5D01G246000.1	Wheat	mitochondrion	39.46	39.89
TraesCS5B01G237500.1	Wheat	mitochondrion	39.46	39.89
Solyc06g068960.1.1	Tomato	endoplasmic reticulum, unclear	32.43	38.96
TraesCS5A01G238900.1	Wheat	mitochondrion	38.38	38.8
Zm00001d020722_P001	Maize	cytosol, mitochondrion	38.38	38.59
Solyc11g044920.1.1	Tomato	cytosol	22.7	34.71
Solyc05g050750.1.1	Tomato	cytosol, unclear	28.11	34.67
Solyc06g083000.1.1	Tomato	cytosol	27.57	34.23
Solyc03g118810.1.1	Tomato	cytosol	30.27	34.15
Solyc01g005370.2.1	Tomato	cytosol	31.35	33.72
Solyc09g055880.1.1	Tomato	cytosol	27.03	33.33
Solyc04g008000.2.1	Tomato	cytosol, plastid	30.27	29.32
Solyc07g007950.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	31.35	26.13
Solyc10g079420.1.1	Tomato	nucleus, plastid	28.11	25.37
Solyc10g074740.1.1	Tomato	cytosol, plastid	25.41	23.62
Solyc04g018110.1.1	Tomato	plastid	29.73	22.73

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	InterPro:IPR002048	UniProt:K4B335	PFAM:PF13499	PRINTS:PR01697	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF620	SMART:SM00054	SUPFAM:SSF47473	EnsemblPlantsGene:Solyc01g108190.2
EnsemblPlants:Solyc01g108190.2.1	UniParc:UPI000276823C	:	:	:	:

Description

Calmodulin-like protein 1 [Source:Projected from Arabidopsis thaliana (AT2G15680) UniProtKB/Swiss-Prot;Acc:Q9ZQE6]

Coordinates

chr1:-:95554476..95555749

Molecular Weight (calculated)

21135.2 Da

IEP (calculated)

8.028

GRAVY (calculated)

-0.608

Length

185 amino acids

Sequence
(BLAST)

001: MSNPSFLDFQ YNLSKRSFLR KPTRMFTRER QNSRSLPVYQ PSVDELKKVF DRFDSNKDGK ISPEEYKAIL KAMGKKNLLT REVQKIFDVA DADGDGFIDF
101: NEFVAVQKKE GGVKTTDLQS AFHTFDKDGD GRISVQEVYE LQKGLGQRCS LQDCRKMVKA VDANGDGVID LDEFVTMMTR TMTLC

Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)

001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV

Arabidopsis Description

CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.