CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76994	Soybean	cytosol, plastid	91.98	91.98
KRH57807	Soybean	plastid	68.98	68.25
KRH04628	Soybean	plastid	68.45	67.37
Solyc02g065000.1.1	Tomato	cytosol	45.99	49.71
PGSC0003DMT400089961	Potato	cytosol	45.45	49.13
KRH50269	Soybean	mitochondrion	46.52	47.03
HORVU5Hr1G068490.1	Barley	cytosol	21.39	46.51
KRH71148	Soybean	cytosol	44.92	45.41
KRH17370	Soybean	cytosol	31.55	41.84
KRH30955	Soybean	cytosol	30.48	41.61
EER96860	Sorghum	cytosol, mitochondrion	40.64	41.3
KRG97926	Soybean	cytosol	30.48	41.01
KRH73006	Soybean	cytosol	30.48	40.43
TraesCS5B01G237500.1	Wheat	mitochondrion	38.5	39.34
TraesCS5D01G246000.1	Wheat	mitochondrion	37.97	38.8
KRH75577	Soybean	cytosol	31.02	38.16
KRH29625	Soybean	cytosol	21.39	37.74
TraesCS5A01G238900.1	Wheat	mitochondrion	36.9	37.7
Zm00001d020722_P001	Maize	cytosol, mitochondrion	36.9	37.5
KRG95097	Soybean	cytosol	30.48	37.5
KRH66763	Soybean	cytosol	29.95	36.84
Os09t0458700-01	Rice	cytosol, mitochondrion	36.36	36.76
KRH49632	Soybean	cytosol, mitochondrion, plastid	34.76	35.71
KRH60410	Soybean	cytosol, plastid	35.29	35.11
KRH24162	Soybean	cytosol	25.67	34.29
KRH37459	Soybean	cytosol	18.18	33.33
GSMUA_Achr9P27060_001	Banana	plastid	34.22	32.49
KRH76288	Soybean	plastid	36.36	31.78
KRH00581	Soybean	plastid	37.43	31.39
KRH41828	Soybean	cytosol	29.95	31.11
KRH65252	Soybean	plastid	35.29	30.84
KRH23209	Soybean	cytosol, mitochondrion	28.88	29.35
KRH48613	Soybean	cytosol	27.81	29.05
KRH16247	Soybean	cytosol	20.32	29.01
KRH02767	Soybean	cytosol	22.99	28.29
KRH10131	Soybean	endoplasmic reticulum	30.48	27.01
KRH40630	Soybean	mitochondrion	26.2	26.78
KRH24625	Soybean	cytosol	31.02	26.24
KRH03663	Soybean	endoplasmic reticulum, extracellular	31.55	25.76
KRH60530	Soybean	plastid	29.41	25.46
KRH15405	Soybean	cytosol	19.25	25.0
KRG95139	Soybean	plastid	28.88	24.77
KRH66816	Soybean	plastid	28.34	24.2
KRH20147	Soybean	extracellular	29.41	24.02

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100787013	MapMan:35.1	EMBL:ACUP02006755	ncoils:Coil	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_11G056500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
UniProt:I1LHF1	InterPro:IPR002048	EnsemblPlants:KRH28478	ProteinID:KRH28478	ProteinID:KRH28478.1	PFAM:PF13499
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR10891	PANTHER:PTHR10891:SF685	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI000233C67D	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:4265079..4266558

Molecular Weight (calculated)

21050.0 Da

IEP (calculated)

8.196

GRAVY (calculated)

-0.568

Length

187 amino acids

Sequence
(BLAST)

001: MSNLSFLKFN YSFSWKPSSS RKNVAKKNSF VSRQTSNEGQ SFQPTKEEMK WVFQKFDTNR DGKVSLEEYK AAARALDRAI GEAEAVKAFR VMDIDGDGFI
101: DLNEFMEMFN GEGRIKETEI KNAFQVFDLN GDGKISAEEL SHVLKRLGES CSLSACKKMV KGVDGNGDGF IDLNEFTRMM MSGKKLG

Best Arabidopsis Sequence Match ( AT2G15680.1 )
(BLAST)

001: MSNVSFLELQ YKLSKNKMLR KPSRMFSRDR QSSGLSSPGP GGFSQPSVNE MRRVFSRFDL DKDGKISQTE YKVVLRALGQ ERAIEDVPKI FKAVDLDGDG
101: FIDFREFIDA YKRSGGIRSS DIRNSFWTFD LNGDGKISAE EVMSVLWKLG ERCSLEDCNR MVRAVDADGD GLVNMEEFIK MMSSNNV

Arabidopsis Description

CML30CML30 [Source:UniProtKB/TrEMBL;Acc:A0A178VPG8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.