CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76288	Soybean	plastid	90.65	90.65
KRH00581	Soybean	plastid	90.65	87.0
VIT_15s0048g00790.t01	Wine grape	mitochondrion	54.67	57.35
KRH17370	Soybean	cytosol	32.24	48.94
KRH73006	Soybean	cytosol	31.78	48.23
PGSC0003DMT400033250	Potato	cytosol	41.59	46.35
KRH30955	Soybean	cytosol	28.97	45.26
KRG97926	Soybean	cytosol	28.97	44.6
KRH75577	Soybean	cytosol	30.37	42.76
KRH29625	Soybean	cytosol	19.16	38.68
KRH66763	Soybean	cytosol	26.64	37.5
KRH48613	Soybean	cytosol	31.31	37.43
KRH60410	Soybean	cytosol, plastid	32.71	37.23
KRG95097	Soybean	cytosol	26.17	36.84
KRH24162	Soybean	cytosol	23.83	36.43
KRH49632	Soybean	cytosol, mitochondrion, plastid	30.84	36.26
KRH41828	Soybean	cytosol	30.37	36.11
KRH37459	Soybean	cytosol	16.82	35.29
KRH28478	Soybean	cytosol, plastid	30.84	35.29
KRH16247	Soybean	cytosol	21.5	35.11
KRH02767	Soybean	cytosol	24.77	34.87
KRH76994	Soybean	cytosol, plastid	30.37	34.76
KRH15405	Soybean	cytosol	22.9	34.03
KRH57807	Soybean	plastid	28.04	31.75
KRH04628	Soybean	plastid	28.04	31.58
KRH50269	Soybean	mitochondrion	27.1	31.35
KRH71148	Soybean	cytosol	27.1	31.35
KRH40630	Soybean	mitochondrion	25.7	30.05
KRH23209	Soybean	cytosol, mitochondrion	25.23	29.35
KRH60530	Soybean	plastid	28.5	28.24
KRH10131	Soybean	endoplasmic reticulum	27.57	27.96
KRH24625	Soybean	cytosol	28.5	27.6
KRG95139	Soybean	plastid	28.04	27.52
KRH66816	Soybean	plastid	28.04	27.4
KRH03663	Soybean	endoplasmic reticulum, extracellular	28.97	27.07
KRH20147	Soybean	extracellular	28.04	26.2

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EMBL:ACUP02001318	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom
EnsemblPlantsGene:GLYMA_03G022800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1JKK7	InterPro:IPR002048
EnsemblPlants:KRH65252	ProteinID:KRH65252	ProteinID:KRH65252.1	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222
PANTHER:PTHR10891	PANTHER:PTHR10891:SF695	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0002962C4D	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:2408033..2408677

Molecular Weight (calculated)

24328.4 Da

IEP (calculated)

5.738

GRAVY (calculated)

-0.285

Length

214 amino acids

Sequence
(BLAST)

001: MLEPFATCFT FLHRKTKFFL NKPRIKEMMG ACCKRRQSNI KLFSSSSDLS TSSFLHMKLS TQFHQVFKLI DTNGDGKISI NELSELLSSL GYNKCTAVKE
101: AEGMVKVLDF NRDGFVDLDE FMIVMNGMEE EKEEKFGSGM EHDGGYLMDA FLIFDTDKNG LISAKELQRV LINLGCDNCS LRECKRMIKG VDKNGDGFVD
201: FEEFRSMMQS GFAN

Best Arabidopsis Sequence Match ( AT1G24620.1 )
(BLAST)

001: MFNKNQGSNG GSSSNVGIGA DSPYLQKARS GKTEIRELEA VFKKFDVNGD GKISSKELGA IMTSLGHEVP EEELEKAITE IDRKGDGYIN FEEFVELNTK
101: GMDQNDVLEN LKDAFSVYDI DGNGSISAEE LHEVLRSLGD ECSIAECRKM IGGVDKDGDG TIDFEEFKIM MTMGSRRDNV MGGGPR

Arabidopsis Description

CML25Probable calcium-binding protein CML25 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.