Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G69420.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT1G69420.1 | KRH27037 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50551 | Soybean | plasma membrane | 81.35 | 81.22 |
| KRH70813 | Soybean | plasma membrane | 73.15 | 72.8 |
| KRH74943 | Soybean | plasma membrane | 72.19 | 72.07 |
| GSMUA_Achr4P10850_001 | Banana | extracellular | 3.54 | 66.67 |
| VIT_01s0113g00420.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 67.68 | 66.61 |
| Solyc05g012790.2.1 | Tomato | plasma membrane | 63.83 | 63.02 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 62.7 | 61.9 |
| CDX95936 | Canola | plasma membrane | 54.5 | 61.41 |
| GSMUA_Achr10P... | Banana | plasma membrane | 41.32 | 61.05 |
| GSMUA_Achr5P16110_001 | Banana | plasma membrane | 27.17 | 61.01 |
| CDY40920 | Canola | plasma membrane | 55.79 | 60.14 |
| CDY28549 | Canola | plasma membrane | 54.82 | 59.72 |
| CDY44067 | Canola | plasma membrane | 54.18 | 59.23 |
| Bra004380.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 55.79 | 58.12 |
| AT1G69420.1 | Thale cress | plasma membrane | 55.31 | 57.72 |
| Bra038305.1-P | Field mustard | plasma membrane | 54.02 | 57.05 |
| CDY51503 | Canola | plasma membrane | 53.54 | 56.73 |
| GSMUA_Achr6P07830_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 54.98 | 54.81 |
| CDY07350 | Canola | plasma membrane | 49.84 | 53.91 |
| Bra004000.1-P | Field mustard | cytosol, nucleus, plasma membrane | 47.59 | 53.82 |
| TraesCS4B01G252500.1 | Wheat | plasma membrane | 50.32 | 53.5 |
| HORVU3Hr1G033580.1 | Barley | plasma membrane | 13.83 | 53.42 |
| TraesCS4D01G252800.1 | Wheat | plasma membrane | 50.0 | 53.07 |
| TraesCS4A01G051700.1 | Wheat | plasma membrane | 49.84 | 52.9 |
| HORVU2Hr1G034630.4 | Barley | plasma membrane | 51.77 | 52.61 |
| TraesCS2D01G191000.1 | Wheat | plasma membrane | 51.45 | 52.37 |
| Os03t0209500-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 50.32 | 52.34 |
| TraesCS2A01G183200.1 | Wheat | plasma membrane | 51.45 | 52.29 |
| TraesCS2B01G209800.1 | Wheat | golgi | 51.13 | 51.96 |
| EER99646 | Sorghum | plasma membrane | 51.29 | 51.7 |
| Os10t0337500-01 | Rice | plasma membrane | 49.04 | 51.17 |
| Zm00001d030508_P001 | Maize | plasma membrane | 46.46 | 49.49 |
| KXG39903 | Sorghum | plasma membrane | 47.91 | 49.26 |
| Os07t0596000-01 | Rice | plasma membrane | 19.45 | 48.79 |
| HORVU4Hr1G060520.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 14.79 | 48.68 |
| Zm00001d006757_P003 | Maize | plasma membrane | 51.77 | 48.06 |
| Zm00001d022038_P007 | Maize | plasma membrane | 52.57 | 47.39 |
| HORVU4Hr1G069190.5 | Barley | cytosol, peroxisome | 48.55 | 42.66 |
| CDX84493 | Canola | cytosol | 8.68 | 39.13 |
| Zm00001d028039_P004 | Maize | plasma membrane, plastid | 47.59 | 38.74 |
| GSMUA_Achr5P16100_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 17.2 | 37.28 |
| GSMUA_Achr4P10840_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 13.67 | 35.56 |
| KRH60890 | Soybean | plasma membrane | 29.74 | 28.82 |
| KRH51572 | Soybean | plasma membrane | 29.74 | 28.64 |
| KRH33653 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 22.03 | 26.97 |
| KRH24108 | Soybean | plasma membrane | 28.62 | 24.09 |
| KRH29083 | Soybean | plasma membrane | 28.14 | 23.78 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02012214 | EnsemblPlantsGene:GLYMA_20G030100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | UniProt:I1NDL5 |
| EnsemblPlants:KRG89539 | ProteinID:KRG89539 | ProteinID:KRG89539.1 | PFAM:PF01529 | PFscan:PS50216 | PANTHER:PTHR22883 |
| PANTHER:PTHR22883:SF119 | MetaCyc:PWY-7420 | InterPro:Palmitoyltrfase_DHHC | TMHMM:TMhelix | UniParc:UPI000233DA9B | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:+:3651707..3657597
Molecular Weight (calculated)
67877.5 Da
IEP (calculated)
8.743
GRAVY (calculated)
-0.104
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKHGWQLPY HPLQVVAAAV FLALGFAFYV FFAPFVGEKM YQYIVIGLYS PLIISVFGLY IWCAAADPGD PGVFKSKKYL KIPDSKKLAE LKNSKLGEES
101: SSSMHEVNAS IVGAKSVDKE ALGTKGTSKD ASNSVEKSTL SSCSSCVLLV SSPCAYICSC SSSTEKSSDK QTIEDGMFYC SLCEVEVFKY SKHCRVCDKC
201: VDHFDHHCRW LNNCIGKKNY RQFFTLMVAA MLLFILQWLT GILVLICCFV KRKQFSVDIS SKLGTSFSMV PFVIVVSICT ILAMIATLPV VQLFFFHILL
301: IKKGLSTYDY IIAMREQEQE QLGNGGQQSP QMSTVSSFTG LSSASSFTTL HRGAWCTPPR LLLEDQFDVV PPETGSVSSL GKKTTREDPL KKKNPGTVKI
401: SPWTLARLNA EEISKAASEA RKKSKVLQPV TRHGEAISLE LENSFGSSGR RMVPRIEGNK KRASKRVHHP ADLSMESLTK VSSSNTDKAL SGMSRLAPLP
501: IEACSTFQTS QAMSSSAGIV PSSPESSLDS PDIHPFGVSS SSAEKARQLA GPSAAGAATL KEIPLSSSTS DGYEASGGED SDRVDPSRIV QRSTNWTNLL
601: FRADQDDKAF KMSLSSTSVG YR
101: SSSMHEVNAS IVGAKSVDKE ALGTKGTSKD ASNSVEKSTL SSCSSCVLLV SSPCAYICSC SSSTEKSSDK QTIEDGMFYC SLCEVEVFKY SKHCRVCDKC
201: VDHFDHHCRW LNNCIGKKNY RQFFTLMVAA MLLFILQWLT GILVLICCFV KRKQFSVDIS SKLGTSFSMV PFVIVVSICT ILAMIATLPV VQLFFFHILL
301: IKKGLSTYDY IIAMREQEQE QLGNGGQQSP QMSTVSSFTG LSSASSFTTL HRGAWCTPPR LLLEDQFDVV PPETGSVSSL GKKTTREDPL KKKNPGTVKI
401: SPWTLARLNA EEISKAASEA RKKSKVLQPV TRHGEAISLE LENSFGSSGR RMVPRIEGNK KRASKRVHHP ADLSMESLTK VSSSNTDKAL SGMSRLAPLP
501: IEACSTFQTS QAMSSSAGIV PSSPESSLDS PDIHPFGVSS SSAEKARQLA GPSAAGAATL KEIPLSSSTS DGYEASGGED SDRVDPSRIV QRSTNWTNLL
601: FRADQDDKAF KMSLSSTSVG YR
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.