CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 2
endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01925	Canola	golgi	59.84	59.73
VIT_07s0005g02580.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	51.18	59.23
AT4G01730.1	Thale cress	plasma membrane	57.48	57.48
Bra008555.1-P	Field mustard	plasma membrane	57.28	57.17
CDX97254	Canola	plasma membrane	57.28	57.17
PGSC0003DMT400002869	Potato	endoplasmic reticulum, golgi, plasma membrane	53.94	52.59
Solyc01g079100.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	53.54	52.21
GSMUA_Achr1P19020_001	Banana	plasma membrane	47.83	51.05
Zm00001d017871_P002	Maize	plasma membrane	47.64	45.57
Os12t0263100-01	Rice	plasma membrane	47.05	45.35
TraesCS7D01G352800.1	Wheat	golgi	44.49	43.8
KXG30910	Sorghum	peroxisome	47.05	43.22
TraesCS7A01G370300.1	Wheat	golgi	44.49	42.48
TraesCS7B01G258200.1	Wheat	golgi	43.11	42.44
HORVU7Hr1G085240.2	Barley	peroxisome	44.88	39.79
KRH51572	Soybean	plasma membrane	28.74	22.6
KRH60890	Soybean	plasma membrane	28.35	22.43
KRH74943	Soybean	plasma membrane	27.17	22.15
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	26.97	22.03
KRH50551	Soybean	plasma membrane	26.97	21.99
KRH70813	Soybean	plasma membrane	26.77	21.76
KRH24108	Soybean	plasma membrane	28.35	19.49
KRH29083	Soybean	plasma membrane	27.76	19.16

Protein Annotations

EntrezGene:100779504	MapMan:35.1	EMBL:ACUP02006548	EnsemblPlantsGene:GLYMA_10G138200	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0019706
UniProt:I1LAT9	EnsemblPlants:KRH33653	ProteinID:KRH33653	ProteinID:KRH33653.1	PFAM:PF01529	PFscan:PS50216
PANTHER:PTHR22883	PANTHER:PTHR22883:SF53	MetaCyc:PWY-7420	InterPro:Palmitoyltrfase_DHHC	TMHMM:TMhelix	UniParc:UPI000233CC2B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:37186231..37189255

Molecular Weight (calculated)

58193.1 Da

IEP (calculated)

9.756

GRAVY (calculated)

-0.197

Length

508 amino acids

Sequence
(BLAST)

001: MRRHGWQRPL HPLQFVGAAV YGFLVVCFFT FLGLFLGNRT AEITLTLTFS SVAVAVMFLF VRCTAIDPTD RTCFRNKKKQ RAKSDAIPKL NYGFILGQIV
101: MRFFRRVERK LLRTFIKRKY LDPFKTSPQM EPLLPFPLVM KDDDDAIAPN LNEDDISFCA LCDFEVKKHS KHCRTCNRCV EGFDHHCRWL NNCVGKRNYT
201: TFFLLMIFVL LMLLIEGGTA IAIFIRCFVD RRGIEKELQR KLYVDFPRGV LATICVFLLL LTAYSSAALG QLFFFHVVLI RKGMRTYDYI LAMREENEAM
301: DLESLDDSDF SSDESIDFDS PEKPPLMSRF LCKGNQSSPR LSIRIEGETE PSPLIKTKKF HVSINPWKLI KLTREKAQLA AEKAREKIMR EKPMGEHNSL
401: KPLPLETKCG PLMSPDKNMD TKDFGSTSFI AKGRLTESPG GRFSSPRRRF SAGSPTVFSS SMMASPHHKY RSSFDLKLTG VSRELETHIS RQVLCSVISK
501: DDSEPSPR

Best Arabidopsis Sequence Match ( AT4G01730.1 )
(BLAST)

001: MTRRRHGWQR PLHPLQIVGA VIYSVLVAAF YVFLGFFLGN RIAVIALLSV FSSVAVSVIV LFVRCTAIDP TDKTSAKKKR KDKSKGVLMK LRVKVVLSQV
101: VVRFFRRLER KILRNFLRRT YLDPWKSSVQ LEPLLPFPLV MKDDDSVTPD PKEEDDISYC SLCDLEVKRS SKHCRTCNRC VEGFDHHCRW LNNCVGKKNY
201: TTFILLMVFV LLMLIIEGGT ALAVFVRCFV DKKGMEMELK RRLYVEFPQW ALATISIILV LFTAYGSAAM GQLFLFHVVL IRKGMRTYDY ILAMKEENQF
301: TEVDPFDELD SSSDESSDFD SPERLRPTFI SKFMCRKANE NQQRLSIKIE GDEQSPSSTL INKKPGFHVS INPWKLITLS SEKALQAAEK AKERLRKTKP
401: VSGTEENSLK PLPLETKFGL LLDPDNNNTV LQPSTTAAVK LQVSPGRFSS PRRRFSGSSS STVPSPKQKY RTNFDLKLTE VSRELESYIS RQVLCSVIKQ
501: DGSEASPR

Arabidopsis Description

PAT18Protein S-acyltransferase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M115]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.