Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- endoplasmic reticulum 2
- plasma membrane 4
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G352800.1 | Wheat | golgi | 73.81 | 75.39 |
| TraesCS7B01G258200.1 | Wheat | golgi | 73.62 | 75.19 |
| TraesCS7A01G370300.1 | Wheat | golgi | 74.19 | 73.5 |
| Zm00001d017871_P002 | Maize | plasma membrane | 73.24 | 72.69 |
| KXG30910 | Sorghum | peroxisome | 74.76 | 71.25 |
| HORVU7Hr1G085240.2 | Barley | peroxisome | 74.95 | 68.94 |
| GSMUA_Achr1P19020_001 | Banana | plasma membrane | 48.2 | 53.36 |
| CDY01925 | Canola | golgi | 48.2 | 49.9 |
| AT4G01730.1 | Thale cress | plasma membrane | 47.82 | 49.61 |
| Bra008555.1-P | Field mustard | plasma membrane | 46.87 | 48.53 |
| CDX97254 | Canola | plasma membrane | 46.87 | 48.53 |
| KRH33653 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 45.35 | 47.05 |
| VIT_07s0005g02580.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 37.76 | 45.33 |
| Solyc01g079100.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 41.18 | 41.65 |
| PGSC0003DMT400002869 | Potato | endoplasmic reticulum, golgi, plasma membrane | 40.42 | 40.88 |
| Os07t0596000-01 | Rice | plasma membrane | 13.47 | 28.63 |
| Os04t0585100-01 | Rice | golgi | 26.57 | 22.73 |
| Os10t0337500-01 | Rice | plasma membrane | 25.05 | 22.15 |
| Os03t0209500-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 24.67 | 21.74 |
| Os09t0563250-01 | Rice | plasma membrane | 25.05 | 18.86 |
Protein Annotations
| MapMan:35.1 | ProteinID:ABA97357.1 | EMBL:AK102127 | ProteinID:BAF29543.1 | ProteinID:BAT16593.1 | ncoils:Coil |
| ProteinID:EEE62834.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | EnsemblPlantsGene:Os12g0263100 | EnsemblPlants:Os12t0263100-01 | PFAM:PF01529 |
| PFscan:PS50216 | PANTHER:PTHR22883 | PANTHER:PTHR22883:SF53 | InterPro:Palmitoyltrfase_DHHC | UniProt:Q2QUH9 | TMHMM:TMhelix |
| UniParc:UPI00006815F8 | SEG:seg | : | : | : | : |
Description
Similar to Zinc finger, DHHC domain containing 4. (Os12t0263100-01)
Coordinates
chr12:-:9274181..9276999
Molecular Weight (calculated)
59629.4 Da
IEP (calculated)
10.482
GRAVY (calculated)
-0.253
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGESTAAA AATMAWPRWR RRHGWQLPLH PLQLVGMAVF AVLVAAFYVV LGPYLGSTVA GNTLLALFSS SAAGAAALYV RCTAVDPSDR THAKKMKRRR
101: QLARARAGRR GGGGGGRLPR LRYGYILWRY VVRLLRRVEV RVMNRWVRRS YLEQWNSSVQ LDPMLPFAFT SLDDIVSPHA AAGHDISYCP VCDCEVKLRS
201: KHCKTCDRCV DGFDHHCRWL NNCIGRRNYA SFILLMFFVL LMLVIEGGTA IAIFVRCFTD SKGLKMEMEH RLHIRLPKGA HAALSMVFVI FTLYSTVALG
301: QLFFFHVVLI RKGMRTYDYI LAMREAAQAF DPFDDSDSSS DESIDFDSPE RPSFLSRIFC RKDELSESTR KLSIRIENEP SDGTRRKDDI QINPWTLIKM
401: SKEKAMAAAE RARERIRNKL PSTTTSPMKP LPVETKRGPL NQERKHIMTG KEIVPVFTKS WLSGSPTARL SSPRRRFSGS PSPKPQRHRS NFDLRLAEVS
501: RELESHISKQ VLCSVVMKGV EDEDSPS
101: QLARARAGRR GGGGGGRLPR LRYGYILWRY VVRLLRRVEV RVMNRWVRRS YLEQWNSSVQ LDPMLPFAFT SLDDIVSPHA AAGHDISYCP VCDCEVKLRS
201: KHCKTCDRCV DGFDHHCRWL NNCIGRRNYA SFILLMFFVL LMLVIEGGTA IAIFVRCFTD SKGLKMEMEH RLHIRLPKGA HAALSMVFVI FTLYSTVALG
301: QLFFFHVVLI RKGMRTYDYI LAMREAAQAF DPFDDSDSSS DESIDFDSPE RPSFLSRIFC RKDELSESTR KLSIRIENEP SDGTRRKDDI QINPWTLIKM
401: SKEKAMAAAE RARERIRNKL PSTTTSPMKP LPVETKRGPL NQERKHIMTG KEIVPVFTKS WLSGSPTARL SSPRRRFSGS PSPKPQRHRS NFDLRLAEVS
501: RELESHISKQ VLCSVVMKGV EDEDSPS
001: MTRRRHGWQR PLHPLQIVGA VIYSVLVAAF YVFLGFFLGN RIAVIALLSV FSSVAVSVIV LFVRCTAIDP TDKTSAKKKR KDKSKGVLMK LRVKVVLSQV
101: VVRFFRRLER KILRNFLRRT YLDPWKSSVQ LEPLLPFPLV MKDDDSVTPD PKEEDDISYC SLCDLEVKRS SKHCRTCNRC VEGFDHHCRW LNNCVGKKNY
201: TTFILLMVFV LLMLIIEGGT ALAVFVRCFV DKKGMEMELK RRLYVEFPQW ALATISIILV LFTAYGSAAM GQLFLFHVVL IRKGMRTYDY ILAMKEENQF
301: TEVDPFDELD SSSDESSDFD SPERLRPTFI SKFMCRKANE NQQRLSIKIE GDEQSPSSTL INKKPGFHVS INPWKLITLS SEKALQAAEK AKERLRKTKP
401: VSGTEENSLK PLPLETKFGL LLDPDNNNTV LQPSTTAAVK LQVSPGRFSS PRRRFSGSSS STVPSPKQKY RTNFDLKLTE VSRELESYIS RQVLCSVIKQ
501: DGSEASPR
101: VVRFFRRLER KILRNFLRRT YLDPWKSSVQ LEPLLPFPLV MKDDDSVTPD PKEEDDISYC SLCDLEVKRS SKHCRTCNRC VEGFDHHCRW LNNCVGKKNY
201: TTFILLMVFV LLMLIIEGGT ALAVFVRCFV DKKGMEMELK RRLYVEFPQW ALATISIILV LFTAYGSAAM GQLFLFHVVL IRKGMRTYDY ILAMKEENQF
301: TEVDPFDELD SSSDESSDFD SPERLRPTFI SKFMCRKANE NQQRLSIKIE GDEQSPSSTL INKKPGFHVS INPWKLITLS SEKALQAAEK AKERLRKTKP
401: VSGTEENSLK PLPLETKFGL LLDPDNNNTV LQPSTTAAVK LQVSPGRFSS PRRRFSGSSS STVPSPKQKY RTNFDLKLTE VSRELESYIS RQVLCSVIKQ
501: DGSEASPR
Arabidopsis Description
PAT18Protein S-acyltransferase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M115]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.