Factsheet for AT4G01730.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008555.1-P	Field mustard	plasma membrane	86.61	86.44
CDX97254	Canola	plasma membrane	86.61	86.44
CDY01925	Canola	golgi	80.31	80.16
VIT_07s0005g02580.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	52.36	60.59
KRH33653	Soybean	endoplasmic reticulum, golgi, plasma membrane	57.48	57.48
GSMUA_Achr1P19020_001	Banana	plasma membrane	51.57	55.04
Solyc01g079100.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	53.74	52.4
PGSC0003DMT400002869	Potato	endoplasmic reticulum, golgi, plasma membrane	53.15	51.82
Os12t0263100-01	Rice	plasma membrane	49.61	47.82
TraesCS7D01G352800.1	Wheat	golgi	47.83	47.09
TraesCS7B01G258200.1	Wheat	golgi	46.46	45.74
Zm00001d017871_P002	Maize	plasma membrane	47.05	45.01
TraesCS7A01G370300.1	Wheat	golgi	47.05	44.92
KXG30910	Sorghum	peroxisome	48.62	44.67
HORVU7Hr1G085240.2	Barley	peroxisome	47.05	41.71
AT2G33640.1	Thale cress	plasma membrane	24.61	22.12
AT1G69420.1	Thale cress	plasma membrane	24.8	21.14
AT4G15080.2	Thale cress	golgi	27.17	19.22
AT3G22180.1	Thale cress	plasma membrane	25.79	18.56

Protein Annotations

MapMan:35.1	EntrezGene:826911	UniProt:A0A178V0W1	ProteinID:AAC72868.1	ProteinID:AEE82070.1	ArrayExpress:AT4G01730
EnsemblPlantsGene:AT4G01730	RefSeq:AT4G01730	TAIR:AT4G01730	RefSeq:AT4G01730-TAIR-G	EnsemblPlants:AT4G01730.1	TAIR:AT4G01730.1
ProteinID:CAB77743.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	GO:GO:0019706	GO:GO:0030659	GO:GO:0031410	RefSeq:NP_192082.4	ProteinID:OAO99959.1
PFAM:PF01529	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PFscan:PS50216
PANTHER:PTHR22883	PANTHER:PTHR22883:SF53	InterPro:Palmitoyltrfase_DHHC	UniProt:Q9M115	TMHMM:TMhelix	UniParc:UPI0001A7B224
SEG:seg	:	:	:	:	:

Description

PAT18Protein S-acyltransferase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M115]

Coordinates

chr4:+:749307..752034

Molecular Weight (calculated)

57907.6 Da

IEP (calculated)

10.100

GRAVY (calculated)

-0.185

Length

508 amino acids

Sequence
(BLAST)

001: MTRRRHGWQR PLHPLQIVGA VIYSVLVAAF YVFLGFFLGN RIAVIALLSV FSSVAVSVIV LFVRCTAIDP TDKTSAKKKR KDKSKGVLMK LRVKVVLSQV
101: VVRFFRRLER KILRNFLRRT YLDPWKSSVQ LEPLLPFPLV MKDDDSVTPD PKEEDDISYC SLCDLEVKRS SKHCRTCNRC VEGFDHHCRW LNNCVGKKNY
201: TTFILLMVFV LLMLIIEGGT ALAVFVRCFV DKKGMEMELK RRLYVEFPQW ALATISIILV LFTAYGSAAM GQLFLFHVVL IRKGMRTYDY ILAMKEENQF
301: TEVDPFDELD SSSDESSDFD SPERLRPTFI SKFMCRKANE NQQRLSIKIE GDEQSPSSTL INKKPGFHVS INPWKLITLS SEKALQAAEK AKERLRKTKP
401: VSGTEENSLK PLPLETKFGL LLDPDNNNTV LQPSTTAAVK LQVSPGRFSS PRRRFSGSSS STVPSPKQKY RTNFDLKLTE VSRELESYIS RQVLCSVIKQ
501: DGSEASPR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.