Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g079100.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 88.29 | 88.29 |
| VIT_07s0005g02580.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 49.9 | 59.23 |
| KRH33653 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 52.59 | 53.94 |
| Bra008555.1-P | Field mustard | plasma membrane | 52.21 | 53.44 |
| CDX97254 | Canola | plasma membrane | 52.21 | 53.44 |
| AT4G01730.1 | Thale cress | plasma membrane | 51.82 | 53.15 |
| CDY01925 | Canola | golgi | 50.48 | 51.67 |
| GSMUA_Achr1P19020_001 | Banana | plasma membrane | 43.57 | 47.69 |
| Os12t0263100-01 | Rice | plasma membrane | 40.88 | 40.42 |
| TraesCS7D01G352800.1 | Wheat | golgi | 39.73 | 40.12 |
| Zm00001d017871_P002 | Maize | plasma membrane | 40.31 | 39.55 |
| TraesCS7B01G258200.1 | Wheat | golgi | 38.77 | 39.15 |
| KXG30910 | Sorghum | peroxisome | 41.07 | 38.7 |
| TraesCS7A01G370300.1 | Wheat | golgi | 39.35 | 38.53 |
| HORVU7Hr1G085240.2 | Barley | peroxisome | 40.12 | 36.47 |
| PGSC0003DMT400025680 | Potato | plasma membrane | 27.83 | 22.45 |
| PGSC0003DMT400072839 | Potato | plasma membrane | 24.95 | 20.63 |
Protein Annotations
| EntrezGene:102584285 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0019706 | UniProt:M0ZKT1 |
| PFAM:PF01529 | EnsemblPlantsGene:PGSC0003DMG400001118 | PGSC:PGSC0003DMG400001118 | EnsemblPlants:PGSC0003DMT400002869 | PFscan:PS50216 | PANTHER:PTHR22883 |
| PANTHER:PTHR22883:SF53 | InterPro:Palmitoyltrfase_DHHC | TMHMM:TMhelix | UniParc:UPI000296EAAE | RefSeq:XP_006349140.1 | SEG:seg |
Description
Zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001118]
Coordinates
chr1:-:63464447..63468323
Molecular Weight (calculated)
59529.0 Da
IEP (calculated)
10.396
GRAVY (calculated)
-0.142
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRHGWQRPL HTLQIVGISV FCFLLVFFYT FIGLLLGNRV VEITVTSVFS FVALSAAFLF VRCAAIDPTD KTRFRMRRKS TRTAFSNLNY GFVLGQIVVR
101: FLRRIERRVL KTFIRRKYLD PLKSNLHLEP LLTFPLLVKD DLVAQQTKDD DISFCSLCDF EVKKRSKHCR TCNRCVEGFD HHCRWLNNCV GKKNYTSFIF
201: LMIFLLIMLL IEGGTAAAIF VRCFANKRSI ELEIQRRFSA KFPRGVLATI CVILFFMTSY CAAALGQLFL FHIVLIRKGM RTYDYILAMR EENESMELLE
301: SSEDSDSSSD ESIDFDSPEK PSLVSRLTCR EKGMNQSLET VSIKIDGESS TLKEKRGFRA NIDPWKLISM SREKALKAAE KAKERLIKQK EIVDPLKPLP
401: LETRSGPLMN LDTNRVPLSV ASSRELALSK EVIITKGRVI RGGGSPMQLS SPRRRHSYSP TVVPTPRSGN TTVPSPSPKH RYKGNFDLKL TQVSKELETY
501: ISRQVLFSAL KKENETAASP R
101: FLRRIERRVL KTFIRRKYLD PLKSNLHLEP LLTFPLLVKD DLVAQQTKDD DISFCSLCDF EVKKRSKHCR TCNRCVEGFD HHCRWLNNCV GKKNYTSFIF
201: LMIFLLIMLL IEGGTAAAIF VRCFANKRSI ELEIQRRFSA KFPRGVLATI CVILFFMTSY CAAALGQLFL FHIVLIRKGM RTYDYILAMR EENESMELLE
301: SSEDSDSSSD ESIDFDSPEK PSLVSRLTCR EKGMNQSLET VSIKIDGESS TLKEKRGFRA NIDPWKLISM SREKALKAAE KAKERLIKQK EIVDPLKPLP
401: LETRSGPLMN LDTNRVPLSV ASSRELALSK EVIITKGRVI RGGGSPMQLS SPRRRHSYSP TVVPTPRSGN TTVPSPSPKH RYKGNFDLKL TQVSKELETY
501: ISRQVLFSAL KKENETAASP R
001: MTRRRHGWQR PLHPLQIVGA VIYSVLVAAF YVFLGFFLGN RIAVIALLSV FSSVAVSVIV LFVRCTAIDP TDKTSAKKKR KDKSKGVLMK LRVKVVLSQV
101: VVRFFRRLER KILRNFLRRT YLDPWKSSVQ LEPLLPFPLV MKDDDSVTPD PKEEDDISYC SLCDLEVKRS SKHCRTCNRC VEGFDHHCRW LNNCVGKKNY
201: TTFILLMVFV LLMLIIEGGT ALAVFVRCFV DKKGMEMELK RRLYVEFPQW ALATISIILV LFTAYGSAAM GQLFLFHVVL IRKGMRTYDY ILAMKEENQF
301: TEVDPFDELD SSSDESSDFD SPERLRPTFI SKFMCRKANE NQQRLSIKIE GDEQSPSSTL INKKPGFHVS INPWKLITLS SEKALQAAEK AKERLRKTKP
401: VSGTEENSLK PLPLETKFGL LLDPDNNNTV LQPSTTAAVK LQVSPGRFSS PRRRFSGSSS STVPSPKQKY RTNFDLKLTE VSRELESYIS RQVLCSVIKQ
501: DGSEASPR
101: VVRFFRRLER KILRNFLRRT YLDPWKSSVQ LEPLLPFPLV MKDDDSVTPD PKEEDDISYC SLCDLEVKRS SKHCRTCNRC VEGFDHHCRW LNNCVGKKNY
201: TTFILLMVFV LLMLIIEGGT ALAVFVRCFV DKKGMEMELK RRLYVEFPQW ALATISIILV LFTAYGSAAM GQLFLFHVVL IRKGMRTYDY ILAMKEENQF
301: TEVDPFDELD SSSDESSDFD SPERLRPTFI SKFMCRKANE NQQRLSIKIE GDEQSPSSTL INKKPGFHVS INPWKLITLS SEKALQAAEK AKERLRKTKP
401: VSGTEENSLK PLPLETKFGL LLDPDNNNTV LQPSTTAAVK LQVSPGRFSS PRRRFSGSSS STVPSPKQKY RTNFDLKLTE VSRELESYIS RQVLCSVIKQ
501: DGSEASPR
Arabidopsis Description
PAT18Protein S-acyltransferase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9M115]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.