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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G69420.1 Os01t0218200-00 AT2G42580.1 19000166
AT1G69420.1 Os05t0210600-01 AT2G42580.1 19000166
AT1G69420.1 Os05t0587300-01 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G033580.1 Barley plasma membrane 29.44 45.34
HORVU4Hr1G060520.1 Barley endoplasmic reticulum, plasma membrane, vacuole 29.03 38.1
CDX84493 Canola cytosol 20.56 36.96
GSMUA_Achr4P10840_001 Banana extracellular, mitochondrion, plasma membrane, plastid 31.85 33.05
TraesCS2D01G191000.1 Wheat plasma membrane 72.98 29.62
TraesCS2A01G183200.1 Wheat plasma membrane 72.18 29.25
HORVU2Hr1G034630.4 Barley plasma membrane 71.37 28.92
TraesCS2B01G209800.1 Wheat golgi 70.97 28.76
GSMUA_Achr10P... Banana plasma membrane 45.97 27.08
GSMUA_Achr5P16110_001 Banana plasma membrane 29.84 26.71
Zm00001d006757_P003 Maize plasma membrane 71.77 26.57
Zm00001d022038_P007 Maize plasma membrane 71.37 25.65
EER99646 Sorghum plasma membrane 61.29 24.64
CDX95936 Canola plasma membrane 50.4 22.64
CDY40920 Canola plasma membrane 51.21 22.01
CDY44067 Canola plasma membrane 50.4 21.97
CDY28549 Canola plasma membrane 50.0 21.72
AT1G69420.1 Thale cress plasma membrane 51.61 21.48
Bra004380.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 51.21 21.27
KRH70813 Soybean plasma membrane 52.82 20.96
Bra038305.1-P Field mustard plasma membrane 49.6 20.88
KRH74943 Soybean plasma membrane 52.42 20.87
GSMUA_Achr6P07830_001 Banana endoplasmic reticulum, golgi, plasma membrane 52.42 20.83
CDY51503 Canola plasma membrane 49.19 20.78
Os03t0209500-01 Rice endoplasmic reticulum, golgi, plasma membrane 50.0 20.74
KRH50551 Soybean plasma membrane 51.21 20.39
PGSC0003DMT400072839 Potato plasma membrane 51.61 20.32
VIT_01s0113g00420.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 51.61 20.25
CDY07350 Canola plasma membrane 46.77 20.17
Os10t0337500-01 Rice plasma membrane 48.39 20.13
Solyc05g012790.2.1 Tomato plasma membrane 50.4 19.84
KRG89539 Soybean endoplasmic reticulum, golgi, plasma membrane 48.79 19.45
Bra004000.1-P Field mustard cytosol, nucleus, plasma membrane 33.87 15.27
Os04t0585100-01 Rice golgi 35.89 14.45
Os12t0263100-01 Rice plasma membrane 28.63 13.47
Os09t0563250-01 Rice plasma membrane 37.1 13.14
GSMUA_Achr5P16100_001 Banana endoplasmic reticulum, extracellular, plasma membrane 0.81 0.7
GSMUA_Achr4P10850_001 Banana extracellular 0.0 0.0
Protein Annotations
EnsemblPlants:Os07t0596000-01EnsemblPlantsGene:Os07g0596000GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0019706InterPro:Palmitoyltrfase_DHHCPANTHER:PTHR22883
PANTHER:PTHR22883:SF119PFAM:PF01529PFscan:PS50216ProteinID:BAH94012.1ProteinID:BAT02473.1SEG:seg
TMHMM:TMhelixUniParc:UPI0001B66352UniProt:C7J4J0MapMan:35.1::
Description
Zinc finger, DHHC-type domain containing protein. (Os07t0596000-01)
Coordinates
chr7:-:24252923..24257885
Molecular Weight (calculated)
28693.6 Da
IEP (calculated)
8.078
GRAVY (calculated)
0.009
Length
248 amino acids
Sequence
(BLAST)
001: MRRHGWQLPY HPLQVVAVSV FLALAFAFYV FFAPFVGKKV FQDVAVGLYT PLVSFVFFMY IWCAATDPAD PGVLKSKKYL RLYGSGKHKH PKEFRHGISD
101: SGLQVEGTGE KQEHEFAAAS EKSTTRYKDN NPSCCSSTSS VFLIIFYPLY LVFSCCQPRE WSEQQASEEG MFFCSLCEVE VLKYSKHCRV CDKCVDGFDH
201: HCRWLNNCIG KRNYMRFFIL MTSSLFLVYM ICALWASLSY NQQLEYWC
Best Arabidopsis Sequence Match ( AT1G69420.1 )
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.