Factsheet for TraesCS2D01G191000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G427400.1
TraesCS1B01G462300.1
TraesCS1D01G437100.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69420.1	TraesCS1A01G427400.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS1B01G462300.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS1D01G437100.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3A01G143000.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3A01G221800.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3B01G162100.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3B01G251600.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3D01G144600.1	AT2G42580.1	19000166
AT1G69420.1	TraesCS3D01G231300.1	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G183200.1	Wheat	plasma membrane	98.36	98.2
TraesCS2B01G209800.1	Wheat	golgi	92.8	92.65
HORVU2Hr1G034630.4	Barley	plasma membrane	92.31	92.16
EER99646	Sorghum	plasma membrane	77.25	76.5
HORVU3Hr1G033580.1	Barley	plasma membrane	19.48	73.91
Os07t0596000-01	Rice	plasma membrane	29.62	72.98
GSMUA_Achr4P10850_001	Banana	extracellular	3.93	72.73
Zm00001d006757_P003	Maize	plasma membrane	78.89	71.94
Zm00001d022038_P007	Maize	plasma membrane	79.21	70.14
HORVU4Hr1G060520.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	20.62	66.67
GSMUA_Achr5P16110_001	Banana	plasma membrane	27.5	60.65
GSMUA_Achr10P...	Banana	plasma membrane	41.41	60.09
GSMUA_Achr6P07830_001	Banana	endoplasmic reticulum, golgi, plasma membrane	58.43	57.21
TraesCS4D01G252800.1	Wheat	plasma membrane	54.17	56.48
CDX95936	Canola	plasma membrane	49.92	55.25
KRH74943	Soybean	plasma membrane	56.14	55.06
KRH70813	Soybean	plasma membrane	54.99	53.76
CDY40920	Canola	plasma membrane	50.57	53.55
VIT_01s0113g00420.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	54.99	53.16
CDY44067	Canola	plasma membrane	48.94	52.55
Solyc05g012790.2.1	Tomato	plasma membrane	54.17	52.54
CDY28549	Canola	plasma membrane	48.94	52.36
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	52.37	51.45
PGSC0003DMT400072839	Potato	plasma membrane	53.03	51.43
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	50.25	51.42
AT1G69420.1	Thale cress	plasma membrane	49.92	51.17
KRH50551	Soybean	plasma membrane	51.06	50.08
Bra038305.1-P	Field mustard	plasma membrane	48.12	49.92
CDY51503	Canola	plasma membrane	47.3	49.23
CDY07350	Canola	plasma membrane	45.5	48.35
Bra004000.1-P	Field mustard	cytosol, nucleus, plasma membrane	40.92	45.45
GSMUA_Achr5P16100_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	19.15	40.77
CDX84493	Canola	cytosol	9.0	39.86
GSMUA_Achr4P10840_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	14.73	37.66
TraesCS2D01G455700.1	Wheat	golgi	30.44	30.29
TraesCS5D01G375800.1	Wheat	plasma membrane	31.26	27.72
TraesCS7D01G277000.2	Wheat	golgi	29.3	27.37
TraesCS7D01G352800.1	Wheat	golgi	21.93	25.97

Protein Annotations

EnsemblPlants:TraesCS2D01G191000.1	EnsemblPlantsGene:TraesCS2D01G191000	InterPro:Palmitoyltrfase_DHHC	PANTHER:PTHR22883	PANTHER:PTHR22883:SF119	PFAM:PF01529
PFscan:PS50216	SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:+:135282217..135287615

Molecular Weight (calculated)

67320.5 Da

IEP (calculated)

8.304

GRAVY (calculated)

-0.122

Length

611 amino acids

Sequence
(BLAST)

001: MRRHGWQLPY HPLQVVAVSV FVALAFAFYV FFAPFVGRKV FQDAAMGLYT PLVLCVFLLY IWCAATDPAD PGVFKSKKYQ RLYGGCKHRR LKESIQGVSD
101: VGLQLEGTGE KRGHEVADAN EKSMTELKNK SSSCCSATFS AFLLIFSPLS FVFSCCQSRE WSSEQHDSED GMFFCSLCEV EVLKYSKHCR VCDKCVDGFD
201: HHCRWLNNCI GKRNYRRFFL LMTTALFLLI LQSATGVLVL VLCFVQRKEF SMQIVSKLGS SFSIAPFIIV VASCTILAMI ALLPIAQLLF FHILLIKKGI
301: STYDYIIALR EQEQEEVSGE QSPQMSHVSS YGGLSSTSSF GALRRGSWCT PPRLFLEDQF DVIPSEAGSS HNSATKRKDE EVRRKKTSGA VKISPWALAR
401: LNAEEVSRVA AEARKKSKVL VPIRRDEYSL GHETDSSYGG MSSRIDLGPD NTMRTNRRGR PHGDLSLKPV AKISSDAIDS NGSDMVSLAP LQLEARSAFH
501: PSRAASSANV DGSSPDSSLD SPDLHLYRFS GVSSATEDLQ LVALTAPGST PHHGIQLSRS TSDGYEASGG EDSDRIPSRI VHRSSNWASI ILSTDQGVPS
601: SGALLPKNRL P

Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR

Arabidopsis Description

PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.