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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G69420.1 HORVU1Hr1G093390.2 AT2G42580.1 19000166
AT1G69420.1 HORVU3Hr1G027650.2 AT2G42580.1 19000166
AT1G69420.1 HORVU3Hr1G054240.2 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G209800.1 Wheat golgi 97.55 97.55
TraesCS2D01G191000.1 Wheat plasma membrane 92.16 92.31
TraesCS2A01G183200.1 Wheat plasma membrane 91.99 91.99
EER99646 Sorghum plasma membrane 75.0 74.39
Zm00001d006757_P003 Maize plasma membrane 80.88 73.88
GSMUA_Achr4P10850_001 Banana extracellular 3.92 72.73
HORVU3Hr1G033580.1 Barley plasma membrane 18.79 71.43
Os07t0596000-01 Rice plasma membrane 28.92 71.37
Zm00001d022038_P007 Maize plasma membrane 80.23 71.16
HORVU4Hr1G060520.1 Barley endoplasmic reticulum, plasma membrane, vacuole 19.77 64.02
GSMUA_Achr5P16110_001 Banana plasma membrane 28.43 62.82
GSMUA_Achr10P... Banana plasma membrane 42.16 61.28
GSMUA_Achr6P07830_001 Banana endoplasmic reticulum, golgi, plasma membrane 57.03 55.93
VIT_01s0113g00420.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 57.03 55.22
CDY40920 Canola plasma membrane 51.14 54.25
CDX95936 Canola plasma membrane 48.86 54.17
KRH74943 Soybean plasma membrane 54.74 53.77
KRH70813 Soybean plasma membrane 54.09 52.96
PGSC0003DMT400072839 Potato plasma membrane 54.41 52.86
AT1G69420.1 Thale cress plasma membrane 50.65 52.01
KRG89539 Soybean endoplasmic reticulum, golgi, plasma membrane 52.61 51.77
Bra004380.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 50.49 51.76
Solyc05g012790.2.1 Tomato plasma membrane 53.27 51.75
CDY28549 Canola plasma membrane 47.88 51.31
CDY44067 Canola plasma membrane 47.55 51.14
Bra038305.1-P Field mustard plasma membrane 48.69 50.59
CDY51503 Canola plasma membrane 47.71 49.74
KRH50551 Soybean plasma membrane 50.49 49.6
CDY07350 Canola plasma membrane 44.77 47.65
Bra004000.1-P Field mustard cytosol, nucleus, plasma membrane 41.18 45.82
HORVU4Hr1G069190.5 Barley cytosol, peroxisome 52.61 45.48
GSMUA_Achr5P16100_001 Banana endoplasmic reticulum, extracellular, plasma membrane 18.95 40.42
GSMUA_Achr4P10840_001 Banana extracellular, mitochondrion, plasma membrane, plastid 15.2 38.91
CDX84493 Canola cytosol 8.33 36.96
HORVU2Hr1G104880.6 Barley golgi 29.9 29.76
HORVU5Hr1G090020.3 Barley endoplasmic reticulum, plasma membrane 31.37 27.31
HORVU7Hr1G058360.1 Barley nucleus, peroxisome 29.41 25.35
HORVU7Hr1G085240.2 Barley peroxisome 22.71 24.26
Protein Annotations
EnsemblPlants:HORVU2Hr1G034630.4EnsemblPlantsGene:HORVU2Hr1G034630GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016746GO:GO:0019706InterPro:Palmitoyltrfase_DHHCPANTHER:PTHR22883
PANTHER:PTHR22883:SF119PFAM:PF01529PFscan:PS50216SEG:segTMHMM:TMhelixUniParc:UPI000B46BD70
UniProt:A0A287HNZ4MapMan:35.1::::
Description
S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A287HNZ4]
Coordinates
chrchr2H:+:142603672..142609435
Molecular Weight (calculated)
67479.6 Da
IEP (calculated)
8.116
GRAVY (calculated)
-0.115
Length
612 amino acids
Sequence
(BLAST)
001: MRRHGWQLPY HPLQVVAVSV FLALAFAFYV FFAPFVGRKV FQDAAVGLYT PLVLCVFFLY IWCAATDPAD PGVFKSKKYQ RLYGGCKHRR LKESIQGVSD
101: VGLQLEGTGE KREHEVTNAN EKSMTELKNK SSSCCSATFS AFLLIFRPLS FVFSCCQSHE WSSEQQDSED GMFFCSLCEV EVLKYSKHCR VCDKCVDGFD
201: HHCRWLNNCI GKINYRRFFL LMTTALFLLI LQSATGVLVL VLCFVQRKEF SMQIVSKLGS SFSIAPFIIV VASCTILAMI ALLPIAQLLF FHILLIKKGI
301: STYDYIIALR EQEQEEVSGE QSPQMSHVSS YGGLSSTSSF GALRRGSWCT PPRLFLEDQF DVIPSEAGSS HNSATKRKDE EVRRKKTSGA VKISPWALAR
401: LNAEEVSRVA AEARKKSKVL VPIRRDEYSL GHETDSSYGG MSSRIDLGPD NMSRTNRRGR PHGDLSLKPV AKISSDAIDS NGSDMVSLAP LQLEARSAFH
501: PSRAASSANI DGSSPDSSLD SPDLHLYRFS GVSSSAAEDL QLVALTAPGS TPHHGIQLSR STSDGYEASG GEDSDRIPSR IVHRSSNWAS IILSTDQGVP
601: SSGALVPKDR LP
Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)
001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR
Arabidopsis Description
PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.