Factsheet for GSMUA_Achr10P11570_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
golgi 3
mitochondrion 1
endoplasmic reticulum 3
plasma membrane 5
nucleus 1
extracellular 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P25160_001
GSMUA_Achr4P08560_001
GSMUA_Achr7P24480_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69420.1	GSMUA_Achr10P...	AT2G42580.1	19000166
AT1G69420.1	GSMUA_Achr3P25160_001	AT2G42580.1	19000166
AT1G69420.1	GSMUA_Achr4P08560_001	AT2G42580.1	19000166
AT1G69420.1	GSMUA_Achr7P24480_001	AT2G42580.1	19000166
AT1G69420.1	GSMUA_AchrUn_...	AT2G42580.1	19000166
AT1G69420.1	GSMUA_AchrUn_...	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10850_001	Banana	extracellular	6.18	78.79
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	10.45	78.57
GSMUA_Achr5P16110_001	Banana	plasma membrane	50.59	76.9
HORVU3Hr1G033580.1	Barley	plasma membrane	21.62	56.52
GSMUA_Achr6P07830_001	Banana	endoplasmic reticulum, golgi, plasma membrane	76.25	51.44
HORVU4Hr1G060520.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	22.57	50.26
CDX95936	Canola	plasma membrane	62.47	47.64
Os07t0596000-01	Rice	plasma membrane	27.08	45.97
CDY40920	Canola	plasma membrane	62.71	45.75
CDY28549	Canola	plasma membrane	60.57	44.66
CDY44067	Canola	plasma membrane	60.33	44.64
Bra004380.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	63.18	44.56
KRH70813	Soybean	plasma membrane	65.56	44.16
KRH74943	Soybean	plasma membrane	65.08	43.98
TraesCS4B01G252500.1	Wheat	plasma membrane	61.05	43.93
TraesCS4D01G252800.1	Wheat	plasma membrane	60.81	43.69
TraesCS4A01G051700.1	Wheat	plasma membrane	60.81	43.69
VIT_01s0113g00420.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	65.08	43.35
Os03t0209500-01	Rice	endoplasmic reticulum, golgi, plasma membrane	61.52	43.31
CDY07350	Canola	plasma membrane	58.91	43.13
Bra038305.1-P	Field mustard	plasma membrane	60.33	43.12
AT1G69420.1	Thale cress	plasma membrane	60.81	42.95
CDY51503	Canola	plasma membrane	59.62	42.76
PGSC0003DMT400072839	Potato	plasma membrane	63.42	42.38
Solyc05g012790.2.1	Tomato	plasma membrane	63.18	42.22
HORVU2Hr1G034630.4	Barley	plasma membrane	61.28	42.16
TraesCS2B01G209800.1	Wheat	golgi	61.05	41.99
EER99646	Sorghum	plasma membrane	61.28	41.82
KXG39903	Sorghum	plasma membrane	59.62	41.49
Os10t0337500-01	Rice	plasma membrane	58.67	41.44
TraesCS2D01G191000.1	Wheat	plasma membrane	60.09	41.41
KRG89539	Soybean	endoplasmic reticulum, golgi, plasma membrane	61.05	41.32
KRH50551	Soybean	plasma membrane	61.05	41.25
TraesCS2A01G183200.1	Wheat	plasma membrane	59.62	41.01
Zm00001d030508_P001	Maize	plasma membrane	56.53	40.75
GSMUA_Achr4P10840_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	22.8	40.17
Bra004000.1-P	Field mustard	cytosol, nucleus, plasma membrane	52.26	40.0
Zm00001d006757_P003	Maize	plasma membrane	59.86	37.61
Zm00001d022038_P007	Maize	plasma membrane	61.28	37.39
CDX84493	Canola	cytosol	11.88	36.23
HORVU4Hr1G069190.5	Barley	cytosol, peroxisome	59.86	35.59
Zm00001d028039_P004	Maize	plasma membrane, plastid	59.14	32.59
GSMUA_Achr8P33480_001	Banana	endoplasmic reticulum, golgi, plasma membrane	39.67	29.2
GSMUA_Achr7P03550_001	Banana	golgi	37.53	28.06
GSMUA_Achr11P...	Banana	plasma membrane	38.24	27.38
GSMUA_Achr11P...	Banana	golgi	36.82	26.77
GSMUA_Achr1P19020_001	Banana	plasma membrane	28.27	25.0
GSMUA_Achr5P16100_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	9.74	14.29
GSMUA_Achr4P10860_001	Banana	mitochondrion	6.65	7.51

Protein Annotations

EnsemblPlants:GSMUA_Achr10P11570_001	EnsemblPlants:GSMUA_Achr10T11570_001	EnsemblPlantsGene:GSMUA_Achr10G11570_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0019706	InterPro:Palmitoyltrfase_DHHC
PANTHER:PTHR22883	PANTHER:PTHR22883:SF105	PFAM:PF01529	PFscan:PS50216	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002961FA4	UniProt:M0RHD3	MapMan:35.1	:	:	:

Description

Probable S-acyltransferase At1g69420 [Source:GMGC_GENE;Acc:GSMUA_Achr10G11570_001]

Coordinates

chr10:-:20972354..20979510

Molecular Weight (calculated)

47459.2 Da

IEP (calculated)

8.128

GRAVY (calculated)

0.178

Length

421 amino acids

Sequence
(BLAST)

001: MRKHGWQLPY HPLQACSICS VFLALGFAFY VFFVPFVPTK PFQYVVMGLY TPLVTCVFCL YVWCAATDPG DPGIFRCSTK QLNRLPCNSV PCLAVLLSWC
101: GMSCMCNWCQ SHEQSSEQQM DEEGMFYCSL CEVEVLKNSK HCRVCDKCVD GFDHHCRWIN NCIGRKNYRR FFILMASALL LLILQWLIGI LVLIFCFLER
201: KHFSAEIISK LGSSFSLVPF VVVVASCTCL AMVATLPLAQ LLFFHILLIK KGISTYDYII ALREQEQEQE LEQHAIGEPQ SPQMSQVSSF TGLSSASSFN
301: AFHRGAWCTP PRLFLEDQFD VVPPETGTSM NHISKKMMAE EPVRKRNAGK VKISPWTLAR LNAEEVSKAA AQAKKKSKIL QPIVRREILL GHDTDGSIGS
401: ISESYIVTGK IYTAFSKTTI N

Best Arabidopsis Sequence Match ( AT1G69420.2 )
(BLAST)

001: MRKHGWQLPY HPLQVVAVAV FLALGFAFYV FFAPFVGKKI HQYIAMGIYT PLITCVVGLY IWCAASDPAD RGVFRSKKYL KIPENGKFPL AKDIKDGCGS
101: ATGGAKSHDG TCVEDTENGS NKKLESSERS SLLRLLCSPC ALLCSCCSGK DESSEQMSED GMFYCSLCEV EVFKYSKHCR VCDKCVDRFD HHCRWLNNCI
201: GKRNYRKFFS LMVSAIFLLI MQWSTGIFVL VLCLLRRNQF NADIALKLGS SFSLIPFVIV VGVCTVLAML ATLPLAQLFF FHILLIKKGI STYDYIVALR
301: EQEQELEAGG GQQSPQMSMI SSFTGLSSAS SFNTFHRGAW CTPPRLFLED QFDVVPPENA SVSSYGKKSV VEERVKKKPQ PVKISPWTLA RLNAEEVSKA
401: AAEARKKSKI IQPVARRENP FVGLEASSSF GSSGRRMFPT KYEGVNNNGK QRRQSKRIRL PAELPLEPLM NVQTKAAMET STSSGLAPLQ LEARSAFQTS
501: RAMSGSGNVM VTSSPESSLD SHDIHPFRVS SEAEDAAQLN GFSSAVGLMG QQRGQQQQQQ LSMMMMPLSR STSDGYDASG GEDSDQVPSR NIHKSR

Arabidopsis Description

PAT22S-acyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WF77]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.