CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62368	Soybean	cytosol	86.39	92.2
KRH15375	Soybean	cytosol	30.52	85.2
KRH08675	Soybean	cytosol, mitochondrion, plastid	34.38	71.43
KRH16702	Soybean	nucleus	69.2	69.6
KRH18895	Soybean	cytosol	68.34	67.85
VIT_18s0001g05380.t01	Wine grape	plastid	53.72	53.04
Os02t0753500-01	Rice	cytosol	20.63	49.32
AT1G78120.1	Thale cress	cytosol	35.67	46.98
Bra015628.1-P	Field mustard	cytosol	34.53	45.82
CDX87474	Canola	cytosol	34.53	45.82
Bra003657.1-P	Field mustard	cytosol	33.52	45.7
CDX88420	Canola	cytosol	34.38	45.63
CDX79246	Canola	cytosol	33.38	45.51
CDX68030	Canola	cytosol	32.81	44.99
KRH59356	Soybean	plastid	27.65	44.99
HORVU4Hr1G024490.1	Barley	cytosol	20.49	44.69
PGSC0003DMT400022057	Potato	plastid	27.79	44.39
KRH43206	Soybean	cytosol, plastid	33.38	42.52
KRG97591	Soybean	plastid	32.66	41.61
GSMUA_Achr11P...	Banana	plastid	34.38	41.03
KRH31282	Soybean	plastid	33.95	40.72
Solyc04g073940.2.1	Tomato	cytosol	31.66	40.7
PGSC0003DMT400045666	Potato	cytosol	31.52	40.37
GSMUA_Achr3P24690_001	Banana	cytosol	38.68	39.76
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	30.8	36.75
KRH26223	Soybean	nucleus	35.24	36.39
KRH55099	Soybean	nucleus	35.1	36.14
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	29.66	36.13
KRH22291	Soybean	plastid	30.09	35.96
Zm00001d018088_P001	Maize	cytosol	29.66	35.08
KRH21985	Soybean	cytosol	34.67	34.97
KXG30730	Sorghum	cytosol, plastid	29.51	34.92
KRH27330	Soybean	cytosol	34.67	34.67
HORVU6Hr1G074660.5	Barley	plastid	30.09	33.65
TraesCS6A01G301400.1	Wheat	mitochondrion	28.37	33.33
KRH27037	Soybean	nucleus	30.66	31.7
KRH09945	Soybean	cytosol, endoplasmic reticulum	2.15	25.86
KRH23391	Soybean	cytosol	6.16	24.02
KRG99844	Soybean	cytosol	9.17	23.88
KRH46794	Soybean	cytosol	7.74	19.57

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100814381	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02003448	ncoils:Coil
EnsemblPlantsGene:GLYMA_06G104600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR013766	InterPro:IPR019734	UniProt:K7KUC7	EnsemblPlants:KRH53085	ProteinID:KRH53085	ProteinID:KRH53085.1
PFAM:PF00085	PFAM:PF13181	PFAM:PF13414	PFAM:PF13431	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000233A8F4	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:8335742..8339836

Molecular Weight (calculated)

77972.7 Da

IEP (calculated)

9.504

GRAVY (calculated)

-0.544

Length

698 amino acids

Sequence
(BLAST)

001: MAEKTKNKVE VQLGCGLMGR IFHLKTNNRT RKSSVHSLPV KVCNNTAQQQ RDQAKNEAKP SPNHESNVPR DSSIGTIPTL KVEQNPARKS SSSHRAPSAY
101: QNTQNGRASD AARTSIQRSH DSNEESKQQQ KEHAVVNSLE LARISTSANH HHHQNNETKS LAKEFVLPIT GNLLVNSSPR TSITKSKELN TLSGSCSYNS
201: NNSTNKGMMG NIMRKNSDEL AQFRSPRNGR VDPEVLKSMG NEAYKQGRFE EALTLYDRAI AVDSKKATYH CNKSAALIGL GRFLQAIVEC EEAIKLEPSY
301: GRAHTRLATI YFRLGEAEKA LNCNETSSCV DSVLAFQAQA LQNHLSKCTE ARKVKDWKVI LNETQAAISL GADSAPLVYS LHTEALLKLL RHQEAHATYE
401: KMPKFDLDSS NKLFGPVRSA YLLMTGAQIY LAAGRFEDAV TASEQAAKLD PSNFEMNAVV RRARAVTSAR MSGNLLFKAS KFTEAYAVYN EGLEHDPHNS
501: VLLCNRAACR SKLGQFEKAI EDCNVALIIQ PSYSKARLRR ADCNAKLERW EAAIQDYEML LREKPGDEEV ARALFETQLQ LKMLRGEDIK DLKFGSNLFF
601: ISSNDRFRHY VTSPGMSVVL FCNKATHKQV LLVLEQTCKR FPSVNFLKVE IEDHPYLAKS EGVNCIPAFK IYKNGSRIKE IPGNNHDLLE KLVKLYSS

Best Arabidopsis Sequence Match ( AT1G78120.1 )
(BLAST)

001: MAKSKKISTG QIFGCESLLG CIFQSWSPRR RKPSLPEKDH RAKDNLSSKS STTVTNPKIL PRKSTDTSSQ PKKSDSQKPQ QKPKPDENHP RKSSESARKS
101: SDSARKSISS GSSRTESKRF SLNGVMGNII VKPQPAVKTD VTQTKSRWEG KPVNHRLDPE TLKKMGNEEY CRGRFGQALV FYERAISADP KTPTYWSNKS
201: AALISLGRLL EASDACEEAL RLNPTYERAH QRLASLQLRL GEVEKALCHY NEAGKYTETK HIEQVEDVVK CLRRCDEARR SKEWNVALKE TLFAISYGAD
301: SSPRVYALQT EALLHLQRHE EAYSVYQKGT KRFDIDSFIK IFGLSLTSYL LMVGAQVYIA VGRFEDAVTA SRQAARLDPS SEEVNAVARK ARAVASARLS
401: GNLLFNASKF EGASVVYTEG LENDPYNALL LCNRAASRFK LDLFEKAIED CTLALSLQPS YRKARRRRAD SYAKLEKWQH AIQDYELLMM ETPEDEETRR
501: ALTEVNVRFK KQTGGDVRFK GVGSELVVAN

Arabidopsis Description

TPR12TPR12 [Source:UniProtKB/TrEMBL;Acc:A0A178W863]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.