Factsheet for TraesCS6B01G330500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G301400.1	Wheat	mitochondrion	89.7	86.53
HORVU6Hr1G074660.5	Barley	plastid	94.07	86.38
Os02t0753500-01	Rice	cytosol	41.71	81.85
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	74.35	72.82
KXG30730	Sorghum	cytosol, plastid	74.52	72.37
Zm00001d018088_P001	Maize	cytosol	71.03	68.98
CDY08814	Canola	cytosol, plastid	36.82	50.24
GSMUA_Achr11P...	Banana	plastid	49.21	48.21
CDX78366	Canola	cytosol	37.0	47.53
Bra006046.1-P	Field mustard	cytosol	37.0	47.53
CDX81156	Canola	cytosol	36.65	47.09
KRH15375	Soybean	cytosol	18.85	43.2
KRH59356	Soybean	plastid	32.29	43.12
KRH31282	Soybean	plastid	42.76	42.1
KRG97591	Soybean	plastid	39.97	41.79
Bra024360.1-P	Field mustard	mitochondrion	42.41	41.47
KRH43206	Soybean	cytosol, plastid	39.44	41.24
CDY68462	Canola	cytosol	42.23	41.09
KRH08675	Soybean	cytosol, mitochondrion, plastid	24.08	41.07
PGSC0003DMT400022057	Potato	plastid	31.24	40.96
Solyc04g055000.2.1	Tomato	cytosol	41.88	40.89
AT5G65160.1	Thale cress	cytosol	42.23	40.81
AT5G10090.1	Thale cress	cytosol	42.23	40.74
CDX85779	Canola	cytosol	40.66	40.52
CDY40077	Canola	cytosol	40.49	40.35
PGSC0003DMT400053133	Potato	cytosol, plastid	41.88	40.07
Bra009058.1-P	Field mustard	cytosol, mitochondrion	38.57	39.46
CDX69861	Canola	cytosol, mitochondrion	38.57	39.46
CDY21634	Canola	cytosol, mitochondrion	38.22	39.11
VIT_00s0304g00060.t01	Wine grape	plastid	46.95	37.73
AT1G78120.1	Thale cress	cytosol	34.38	37.17
CDX88420	Canola	cytosol	33.86	36.88
CDX87474	Canola	cytosol	33.33	36.31
Bra015628.1-P	Field mustard	cytosol	33.33	36.31
CDX68030	Canola	cytosol	31.94	35.95
Bra003657.1-P	Field mustard	cytosol	32.11	35.94
CDX79246	Canola	cytosol	31.59	35.35
Solyc04g073940.2.1	Tomato	cytosol	33.33	35.17
PGSC0003DMT400045666	Potato	cytosol	33.16	34.86
VIT_18s0001g05380.t01	Wine grape	plastid	40.84	33.1
KRH62368	Soybean	cytosol	36.3	31.8
KRH53085	Soybean	cytosol	36.13	29.66
KRH18895	Soybean	cytosol	35.6	29.02
KRH16702	Soybean	nucleus	34.38	28.39
TraesCS3B01G162100.1	Wheat	cytosol	32.98	28.12
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	32.98	27.47
TraesCS1B01G462300.1	Wheat	cytosol	32.64	26.95
Bra028602.1-P	Field mustard	cytosol	40.66	21.4
TraesCS5B01G335700.1	Wheat	cytosol	8.2	20.52

Protein Annotations

EnsemblPlants:TraesCS6B01G330500.1	EnsemblPlantsGene:TraesCS6B01G330500	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
ncoils:Coil	PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	PFAM:PF13176	PFAM:PF13432	PFscan:PS50005
PFscan:PS50293	SEG:seg	SMART:SM00028	SUPFAM:SSF48452	MapMan:35.1	:

Description

No Description!

Coordinates

chr6B:+:580086365..580089544

Molecular Weight (calculated)

61418.8 Da

IEP (calculated)

9.729

GRAVY (calculated)

-0.518

Length

573 amino acids

Sequence
(BLAST)

001: MTESRRAPSG CAMFGMYSGM FRRRRSASMS SLSRINGSPQ AAADSDAAAA SAPANPAQRK AGVRDDSSLV PRPKVMPLQP QINGAAAAQA QAQRPSGDKG
101: RPNRAMNGGA KAAASPAVEY TGMAAELDKM IQDHQRVKGT TQMMRATSGN MMMHRNLGNL NAGASARSSL DRNTKAAAAS DRPKAGPGSN GYAFSGMGNI
201: VSKSGDQLCR ALSHRTDPEK LKEMGNEEYR EGHYAEAVAL YDQAIMMDPT RPAYWSNKAA ALAALGRLIE AVADCKEAVR IDPSYGRAHH RLGGLYLRLG
301: EPDKAINYLK QSPMDSVNAD VSRAQSVKGR IAKCGDARKV RDWITVLQES QAAVSDGADC APQVMALQAE ALLKLQRHEE ADSALRGAPR FGVDESTKFF
401: GTTAHAYVLM VRAQVDMAAG RLDEAVATAQ TACELDPGSR EAANVHRRAK AVASARQRGN DLFKASRFAE ACAAYGEGLD KGEAGSAVLL CNRAACHAKL
501: GRHEKAVEDC SGALAVRPGY SKARLRRADC NVKLERWEAS LRDYQVLIQE LPENEDVKKA LAEVEAKLKS QRN

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.