Factsheet for Zm00001d009851_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1
nucleus 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plasma membrane
Any Predictor:	mitochondrion, peroxisome, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004494_P001
Zm00001d006366_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d039362_P002
Zm00001d044479_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G76920.1	Zm00001d004494_P001	AT2G42580.1	19000166
AT1G76920.1	Zm00001d006366_P001	AT2G42580.1	19000166
AT1G76920.1	Zm00001d008930_P003	AT2G42580.1	19000166
AT1G76920.1	Zm00001d009724_P009	AT2G42580.1	19000166
AT1G76920.1	Zm00001d011352_P001	AT2G42580.1	19000166
AT1G76920.1	Zm00001d033961_P001	AT2G42580.1	19000166
AT1G76920.1	Zm00001d039362_P002	AT2G42580.1	19000166
AT1G76920.1	Zm00001d044479_P001	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047158_P001	Maize	cytosol	17.29	98.88
Zm00001d003753_P001	Maize	cytosol	17.29	98.88
Zm00001d026678_P001	Maize	plastid	49.71	61.86
EES13145	Sorghum	cytosol, nucleus, plastid	48.33	59.56
Zm00001d002882_P001	Maize	cytosol, nucleus, plastid	47.54	59.17
HORVU2Hr1G124540.2	Barley	cytosol	40.47	57.7
TraesCS2B01G610300.1	Wheat	cytosol, peroxisome, plastid	44.01	54.5
Zm00001d035880_P001	Maize	plastid	19.45	51.56
Zm00001d024013_P001	Maize	cytosol	25.74	50.19
TraesCS2D01G588100.1	Wheat	plastid	43.61	49.89
TraesCS2A01G577100.1	Wheat	cytosol, plasma membrane, plastid	43.81	49.45
Os04t0686700-01	Rice	plastid	35.76	42.82
TraesCS4A01G184400.1	Wheat	mitochondrion, plastid	16.5	42.21
GSMUA_Achr8P07870_001	Banana	cytosol, peroxisome, plastid	32.42	40.05
Bra003700.1-P	Field mustard	cytosol, nucleus, peroxisome, plastid	25.74	35.6
CDY48548	Canola	cytosol, nucleus, peroxisome, plastid	25.54	35.33
CDX68078	Canola	cytosol, nucleus, peroxisome, plastid	25.54	35.33
VIT_18s0076g00350.t01	Wine grape	cytosol	25.74	35.03
PGSC0003DMT400002094	Potato	cytosol	25.74	34.75
Solyc04g071130.1.1	Tomato	extracellular	25.74	34.75
AT1G76920.1	Thale cress	cytosol	25.34	34.49
KRH70323	Soybean	cytosol	24.16	33.52
HORVU7Hr1G083600.1	Barley	extracellular	3.93	31.75
HORVU7Hr1G066100.1	Barley	cytosol, mitochondrion, plastid	9.43	27.27
HORVU5Hr1G045010.1	Barley	extracellular, plastid, vacuole	15.13	22.92
HORVU7Hr1G083560.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	2.95	20.55
HORVU7Hr1G083580.2	Barley	cytosol	2.95	16.3
HORVU2Hr1G124610.1	Barley	cytosol	3.54	8.74

Protein Annotations

EnsemblPlants:Zm00001d009851_P001	EnsemblPlants:Zm00001d009851_T001	EnsemblPlantsGene:Zm00001d009851	InterPro:CLU_dom	InterPro:IPR025697	PANTHER:PTHR12601
PANTHER:PTHR12601:SF6	PFAM:PF13236	PFscan:PS51823	ProteinID:AQK92827.1	SEG:seg	UniParc:UPI0002209C00
UniProt:K7UU99	MapMan:35.1	:	:	:	:

Description

Clustered mitochondria protein

Coordinates

chr8:+:85121086..85124781

Molecular Weight (calculated)

55500.5 Da

IEP (calculated)

9.813

GRAVY (calculated)

-0.281

Length

509 amino acids

Sequence
(BLAST)

001: MAAGSGPAPP AEAQPPPPIH HLPPDALHNV LLRLQLRDAV LLALLPTLRL LLLHHPRPNG GGCLHAFNPA RRTWLRLPFA QFLPYQSFSP IASSTSLLYL
101: WVETSSSTSP LALPPSTSSA SSASPVHPPK SLAVCNPFSD TYRLLPQLGS AWACHDTVLT GPAGTVLIRT ELAALSYTPS RSAKWMKHPL SLPSKPRSPI
201: LASDAVFALC DVGTPWRSQW KLFSCPLAIL TGGCAPVERA VWGDVFEVLK RPRLLARAGG RRVLMIGGLR SSFAMAGTRR GAGGRRMRRA EETRELRTIN
301: KWGEMMYEKI KKLDKELARY VHNNIFFSFA VDSDYEDISK DHKPDCQNGS SRSTKVSSPD VITKPDANHG KSAEVVDSKS EEAQLTDREQ ATYASTNNDL
401: KGTKAYQEAD VSGLHNLAMA IVDYRGHRVV AQSIIPGILQ GDKSDSLLYG SVDNGKKISW NETFHSKVVE AAKQLHLKEH VVLDGSGNPV KLAATVECKG
501: IVGSDDRKR

Best Arabidopsis Sequence Match ( AT1G76920.1 )
(BLAST)

001: MESSPVNCLP PDSLHQIFSS LPIRDIMICR SVCKFFNQLL TSQCFIEIIS TRPPLNLLAL RPPHHHHSHR HSGNGHATNI RPYIHVYDPE QNQWFRFNLD
101: FLPFRSPQPV ASSSGLIYLW GDSIDLAESS KSLVACNPLT RQFKVLPQLG SAWSRHGTVL VDSVNRVMVL TELAALYYSG TVVANQWLKF SSNLPSKPRS
201: PVLMSSSVFA LCDVGSPWRS QWKLFSCKLT NLTITHTNWV CLEKHEWGDI FDIIKRPRLL RGNGDSKLLM IGGLKSTFSL NPACSTILIL RLDLESLEWE
301: EAGRMPLEMY RGFQESSKFK VFGGGDRVYF SAKRMGKLAM WDCWQGWRWI EGVPGYADGL CRGFVFDAKL TLMP

Arabidopsis Description

SKIP15SKP1-interacting partner 15 [Source:UniProtKB/Swiss-Prot;Acc:O49279]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.