Factsheet for Zm00001d010193_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004494_P001
Zm00001d005029_P001
Zm00001d006366_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d039362_P002
Zm00001d044479_P001
Zm00001d052380_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75750.1	Zm00001d004494_P001	AT2G42580.1	19000166
AT1G75750.1	Zm00001d006366_P001	AT2G42580.1	19000166
AT1G75750.1	Zm00001d008930_P003	AT2G42580.1	19000166
AT1G75750.1	Zm00001d009724_P009	AT2G42580.1	19000166
AT1G75750.1	Zm00001d011352_P001	AT2G42580.1	19000166
AT1G75750.1	Zm00001d033961_P001	AT2G42580.1	19000166
AT1G75750.1	Zm00001d039362_P002	AT2G42580.1	19000166
AT1G75750.1	Zm00001d044479_P001	AT2G42580.1	19000166
AT1G75750.1	Zm00001d005029_P001	AT3G54220.1	19228333
AT1G75750.1	Zm00001d052380_P001	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21918	Sorghum	extracellular	76.6	75.0
Os05t0432200-00	Rice	extracellular	70.21	71.74
EES18282	Sorghum	extracellular	72.34	71.58
TraesCS1D01G270100.1	Wheat	extracellular	62.77	64.13
TraesCS1D01G270300.1	Wheat	extracellular	60.64	61.96
HORVU1Hr1G074530.1	Barley	extracellular	59.57	60.87
TraesCS1A01G270100.1	Wheat	extracellular	57.45	58.7
HORVU1Hr1G074580.1	Barley	extracellular	62.77	50.43
AT2G18420.1	Thale cress	extracellular	50.0	50.0
CDY68406	Canola	extracellular	51.06	48.98
VIT_18s0001g14270.t01	Wine grape	extracellular	51.06	48.98
AT1G75750.1	Thale cress	extracellular	51.06	48.98
CDY44046	Canola	extracellular	51.06	48.98
Bra008222.1-P	Field mustard	extracellular	51.06	48.98
CDY13540	Canola	extracellular	51.06	48.98
CDX85912	Canola	extracellular	51.06	48.98
CDY39057	Canola	extracellular	51.06	48.98
CDY47499	Canola	extracellular	50.0	47.96
CDX73193	Canola	extracellular	50.0	47.96
CDY30303	Canola	extracellular	50.0	46.53
Bra029227.1-P	Field mustard	extracellular	48.94	46.46
KRH51705	Soybean	extracellular	48.94	46.0
KRH61042	Soybean	extracellular	48.94	46.0
Bra038550.1-P	Field mustard	extracellular	48.94	45.54
CDX90726	Canola	extracellular	47.87	45.45
CDY65245	Canola	extracellular	47.87	45.45
AT4G09610.1	Thale cress	extracellular	47.87	45.45
KRH17433	Soybean	extracellular	46.81	44.44
KRH05956	Soybean	extracellular	46.81	44.44
AT4G09600.1	Thale cress	extracellular	46.81	44.44
PGSC0003DMT400004046	Potato	extracellular	48.94	44.23
Solyc01g111080.2.1	Tomato	nucleus	48.94	44.23
CDY05065	Canola	extracellular	46.81	43.56
Zm00001d003380_P001	Maize	extracellular	37.23	30.43

Protein Annotations

EMBL:EU966013	EMBL:EU970203	EMBL:EU975135	EnsemblPlants:Zm00001d010193_P001	EnsemblPlants:Zm00001d010193_T001	EnsemblPlantsGene:Zm00001d010193
EntrezGene:100286041	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF12	PFAM:PF02704	ProteinID:AQK93598.1
SEG:seg	SignalP:SignalP-noTM	UniParc:UPI000004A1A2	UniProt:B6TLZ8	MapMan:11.10.2.1.1	:

Description

GRMZM2G164090Gibberellin-regulated protein 2

Coordinates

chr8:-:103471796..103474708

Molecular Weight (calculated)

9929.1 Da

IEP (calculated)

8.160

GRAVY (calculated)

-0.073

Length

94 amino acids

Sequence
(BLAST)

1: MAKASSRLLF SLSLVVLLLL VETTTSPHGQ ADAIDCGASC SYRCSKSGRP KMCLRACGTC CQRCGCVPPG TSGNEDVCPC YANMKTHDGQ HKCP

Best Arabidopsis Sequence Match ( AT1G75750.1 )
(BLAST)

1: MAISKALIAS LLISLLVLQL VQADVENSQK KNGYAKKIDC GSACVARCRL SRRPRLCHRA CGTCCYRCNC VPPGTYGNYD KCQCYASLTT HGGRRKCP

Arabidopsis Description

GASA1GASA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4S5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.