Factsheet for Os05t0432200-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, golgi, nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01
Os11t0124300-01
Os12t0122000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75750.1	Os01t0218200-00	AT2G42580.1	19000166
AT1G75750.1	Os05t0210600-01	AT2G42580.1	19000166
AT1G75750.1	Os05t0587300-01	AT2G42580.1	19000166
AT1G75750.1	Os11t0124300-01	AT3G54220.1	19228333
AT1G75750.1	Os12t0122000-01	AT3G54220.1	19228333

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18282	Sorghum	extracellular	75.0	72.63
Zm00001d010193_P001	Maize	extracellular	71.74	70.21
KXG21918	Sorghum	extracellular	70.65	67.71
TraesCS1D01G270300.1	Wheat	extracellular	61.96	61.96
TraesCS1D01G270100.1	Wheat	extracellular	59.78	59.78
HORVU1Hr1G074530.1	Barley	extracellular	59.78	59.78
TraesCS1A01G270100.1	Wheat	extracellular	58.7	58.7
AT4G09610.1	Thale cress	extracellular	52.17	48.48
KRH51705	Soybean	extracellular	52.17	48.0
AT2G18420.1	Thale cress	extracellular	48.91	47.87
HORVU1Hr1G074580.1	Barley	extracellular	60.87	47.86
CDX90726	Canola	extracellular	51.09	47.47
KRH61042	Soybean	extracellular	51.09	47.0
AT1G75750.1	Thale cress	extracellular	50.0	46.94
VIT_18s0001g14270.t01	Wine grape	extracellular	50.0	46.94
AT4G09600.1	Thale cress	extracellular	50.0	46.46
CDY13540	Canola	extracellular	48.91	45.92
Bra008222.1-P	Field mustard	extracellular	48.91	45.92
CDX73193	Canola	extracellular	48.91	45.92
CDX85912	Canola	extracellular	48.91	45.92
CDY68406	Canola	extracellular	48.91	45.92
CDY47499	Canola	extracellular	48.91	45.92
CDY44046	Canola	extracellular	48.91	45.92
CDY39057	Canola	extracellular	48.91	45.92
CDY05065	Canola	extracellular	50.0	45.54
KRH05956	Soybean	extracellular	48.91	45.45
PGSC0003DMT400004046	Potato	extracellular	51.09	45.19
Solyc01g111080.2.1	Tomato	nucleus	51.09	45.19
Bra038550.1-P	Field mustard	extracellular	48.91	44.55
KRH17433	Soybean	extracellular	47.83	44.44
Bra029227.1-P	Field mustard	extracellular	47.83	44.44
CDY30303	Canola	extracellular	47.83	43.56
CDY65245	Canola	extracellular	45.65	42.42
Os04t0465300-01	Rice	extracellular	36.96	32.38

Protein Annotations

EnsemblPlants:Os05t0432200-00	EnsemblPlantsGene:Os05g0432200	EntrezGene:4338883	InterPro:GASA	PANTHER:PTHR23201	PANTHER:PTHR23201:SF12
PFAM:PF02704	ProteinID:AAT47046.1	ProteinID:AAT58749.1	ProteinID:BAF17544.1	ProteinID:BAS94169.1	ProteinID:EEE63822.1
RefSeq:XP_015638298.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI00003B0D39	UniProt:Q6I5U9	MapMan:11.10.2.1.1

Description

Similar to Gibberellin-regulated protein 2 precursor. (Os05t0432200-00)

Coordinates

chr5:+:21198105..21198987

Molecular Weight (calculated)

9686.0 Da

IEP (calculated)

8.499

GRAVY (calculated)

0.043

Length

92 amino acids

Sequence
(BLAST)

1: MASMAKSLLC ISLVAILLLV ETTAPHGQAY AIDCGAKCGY RCSKSGRPKM CLRACGTCCQ RCGCVPPGTS GNENVCPCYA NMTTHNGRHK CP

Best Arabidopsis Sequence Match ( AT2G18420.1 )
(BLAST)

1: MAVFRVLLAS LLISLLVLDF VHADMVTSND APKIDCNSRC QERCSLSSRP NLCHRACGTC CARCNCVAPG TSGNYDKCPC YGSLTTHGGR RKCP

Arabidopsis Description

GASA11Gibberellin-regulated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:F4IQJ4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.