Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47499 | Canola | extracellular | 92.86 | 92.86 |
| CDX73193 | Canola | extracellular | 91.84 | 91.84 |
| CDY44046 | Canola | extracellular | 87.76 | 87.76 |
| Bra008222.1-P | Field mustard | extracellular | 87.76 | 87.76 |
| CDY39057 | Canola | extracellular | 87.76 | 87.76 |
| CDY13540 | Canola | extracellular | 85.71 | 85.71 |
| CDY68406 | Canola | extracellular | 84.69 | 84.69 |
| CDX85912 | Canola | extracellular | 82.65 | 82.65 |
| Bra038550.1-P | Field mustard | extracellular | 83.67 | 81.19 |
| CDY30303 | Canola | extracellular | 83.67 | 81.19 |
| CDY65245 | Canola | extracellular | 81.63 | 80.81 |
| Bra029227.1-P | Field mustard | extracellular | 78.57 | 77.78 |
| AT2G18420.1 | Thale cress | extracellular | 65.31 | 68.09 |
| Solyc01g111080.2.1 | Tomato | nucleus | 70.41 | 66.35 |
| KRH05956 | Soybean | extracellular | 66.33 | 65.66 |
| KRH17433 | Soybean | extracellular | 66.33 | 65.66 |
| PGSC0003DMT400004046 | Potato | extracellular | 69.39 | 65.38 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 64.29 | 64.29 |
| KRH51705 | Soybean | extracellular | 64.29 | 63.0 |
| KRH61042 | Soybean | extracellular | 62.24 | 61.0 |
| TraesCS1A01G270100.1 | Wheat | extracellular | 51.02 | 54.35 |
| HORVU1Hr1G074530.1 | Barley | extracellular | 48.98 | 52.17 |
| AT4G09600.1 | Thale cress | extracellular | 52.04 | 51.52 |
| EES13089 | Sorghum | extracellular | 58.16 | 51.35 |
| TraesCS1D01G270100.1 | Wheat | extracellular | 47.96 | 51.09 |
| TraesCS1D01G270300.1 | Wheat | extracellular | 47.96 | 51.09 |
| Zm00001d010193_P001 | Maize | extracellular | 48.98 | 51.06 |
| KXG21918 | Sorghum | extracellular | 48.98 | 50.0 |
| Os05t0432200-00 | Rice | extracellular | 46.94 | 50.0 |
| AT4G09610.1 | Thale cress | extracellular | 48.98 | 48.48 |
| EES18282 | Sorghum | extracellular | 46.94 | 48.42 |
| HORVU1Hr1G074580.1 | Barley | extracellular | 46.94 | 39.32 |
| AT1G22690.1 | Thale cress | extracellular | 45.92 | 37.82 |
| AT5G14920.1 | Thale cress | extracellular | 43.88 | 15.64 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:843908 | UniProt:A0A178W4S5 | ProteinID:AAF87108.1 | ProteinID:AEE35754.1 | EMBL:AF462801 |
| ArrayExpress:AT1G75750 | EnsemblPlantsGene:AT1G75750 | RefSeq:AT1G75750 | TAIR:AT1G75750 | RefSeq:AT1G75750-TAIR-G | EnsemblPlants:AT1G75750.1 |
| TAIR:AT1G75750.1 | InterPro:GASA | Symbol:GASA1 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009505 | GO:GO:0009653 |
| GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009739 | GO:GO:0009740 | GO:GO:0009741 | GO:GO:0009826 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030312 |
| GO:GO:0040007 | RefSeq:NP_565116.1 | ProteinID:OAP12681.1 | UniProt:P46689 | PFAM:PF02704 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0002000 | PO:PO:0006504 | PO:PO:0007006 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009073 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF2 | SignalP:SignalP-noTM |
| EMBL:U11766 | UniParc:UPI000004A1D2 | EMBL:Z29940 | SEG:seg | : | : |
Description
GASA1GASA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4S5]
Coordinates
chr1:-:28441501..28442435
Molecular Weight (calculated)
10745.3 Da
IEP (calculated)
9.283
GRAVY (calculated)
-0.155
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MAISKALIAS LLISLLVLQL VQADVENSQK KNGYAKKIDC GSACVARCRL SRRPRLCHRA CGTCCYRCNC VPPGTYGNYD KCQCYASLTT HGGRRKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.