Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024530.1-P | Field mustard | extracellular | 70.59 | 70.0 |
| CDY21382 | Canola | extracellular | 70.59 | 70.0 |
| CDY04794 | Canola | extracellular | 69.75 | 69.17 |
| CDY43288 | Canola | extracellular | 69.75 | 69.17 |
| Solyc11g017440.1.1 | Tomato | extracellular, nucleus | 44.54 | 51.46 |
| VIT_18s0072g01110.t01 | Wine grape | extracellular | 47.9 | 50.89 |
| PGSC0003DMT400023914 | Potato | extracellular | 43.7 | 50.49 |
| AT2G18420.1 | Thale cress | extracellular | 37.82 | 47.87 |
| AT4G09610.1 | Thale cress | extracellular | 38.66 | 46.46 |
| AT1G75750.1 | Thale cress | extracellular | 37.82 | 45.92 |
| AT4G09600.1 | Thale cress | extracellular | 37.82 | 45.45 |
| KRH37871 | Soybean | extracellular | 38.66 | 41.07 |
| AT5G14920.1 | Thale cress | extracellular | 33.61 | 14.55 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:838875 | UniProt:A0A178WAA4 | EMBL:AC003979 | ProteinID:AEE30270.1 | ProteinID:AEE30271.1 |
| ProteinID:AEE30272.1 | EMBL:AK118784 | ArrayExpress:AT1G22690 | EnsemblPlantsGene:AT1G22690 | RefSeq:AT1G22690 | TAIR:AT1G22690 |
| RefSeq:AT1G22690-TAIR-G | EnsemblPlants:AT1G22690.1 | TAIR:AT1G22690.1 | InterPro:GASA | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 |
| RefSeq:NP_001185065.1 | RefSeq:NP_001185066.1 | RefSeq:NP_173683.1 | ProteinID:OAP14445.1 | PFAM:PF02704 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF20 |
| UniProt:Q8GWK5 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000ADF9E | SEG:seg | : |
Description
GASA9Gibberellin-regulated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK5]
Coordinates
chr1:+:8027126..8028126
Molecular Weight (calculated)
12939.6 Da
IEP (calculated)
9.589
GRAVY (calculated)
-0.334
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKMNVVAFV TLIISFLLLS QVLAELSSSS NNETSSVSQT NDENQTAAFK RTYHHRPRIN CGHACARRCS KTSRKKVCHR ACGSCCAKCQ CVPPGTSGNT
101: ASCPCYASIR THGNKLKCP
101: ASCPCYASIR THGNKLKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.