Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43288 | Canola | extracellular | 100.0 | 100.0 |
| Bra024530.1-P | Field mustard | extracellular | 97.5 | 97.5 |
| CDY21382 | Canola | extracellular | 97.5 | 97.5 |
| AT1G22690.1 | Thale cress | extracellular | 69.17 | 69.75 |
| CDX73193 | Canola | extracellular | 40.83 | 50.0 |
| CDY47499 | Canola | extracellular | 40.83 | 50.0 |
| Solyc11g017440.1.1 | Tomato | extracellular, nucleus | 42.5 | 49.51 |
| CDY68406 | Canola | extracellular | 40.0 | 48.98 |
| PGSC0003DMT400023914 | Potato | extracellular | 41.67 | 48.54 |
| CDY65245 | Canola | extracellular | 40.0 | 48.48 |
| VIT_18s0072g01110.t01 | Wine grape | extracellular | 45.0 | 48.21 |
| CDY39057 | Canola | extracellular | 39.17 | 47.96 |
| CDY44046 | Canola | extracellular | 39.17 | 47.96 |
| CDX85912 | Canola | extracellular | 39.17 | 47.96 |
| CDY30303 | Canola | extracellular | 40.0 | 47.52 |
| CDY13540 | Canola | extracellular | 38.33 | 46.94 |
| KRH37871 | Soybean | extracellular | 37.5 | 40.18 |
| CDX90726 | Canola | extracellular | 32.5 | 39.39 |
| CDY05065 | Canola | extracellular | 31.67 | 37.62 |
| CDY72537 | Canola | plastid | 29.17 | 30.97 |
| CDY31392 | Canola | extracellular | 33.33 | 16.0 |
| CDY09898 | Canola | extracellular | 33.33 | 16.0 |
Protein Annotations
| EnsemblPlants:CDY04794 | EnsemblPlantsGene:GSBRNA2T00119490001 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF20 | PFAM:PF02704 |
| ProteinID:CDY04794 | ProteinID:CDY04794.1 | ProteinID:CDY43288.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EE9FA2 |
| UniProt:A0A078EW19 | MapMan:11.10.2.1.1 | : | : | : | : |
Description
BnaC05g17950DBnaC05g17950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EW19]
Coordinates
chrLK031957:-:810766..811668
Molecular Weight (calculated)
13230.0 Da
IEP (calculated)
8.819
GRAVY (calculated)
-0.297
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKMKVVAFV MLISLILLSQ VLADLSSSSN AETSSVTQIQ TNEENQVEAF KRTYHHRPPF NCGYACARRC RETSRKKVCY RACGSCCAKC QCVPPGTSGN
101: TASCPCYANL RTHGNKLKCP
101: TASCPCYANL RTHGNKLKCP
001: MKKMNVVAFV TLIISFLLLS QVLAELSSSS NNETSSVSQT NDENQTAAFK RTYHHRPRIN CGHACARRCS KTSRKKVCHR ACGSCCAKCQ CVPPGTSGNT
101: ASCPCYASIR THGNKLKCP
101: ASCPCYASIR THGNKLKCP
Arabidopsis Description
GASA9Gibberellin-regulated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.