Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G14920.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT5G14920.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31392 | Canola | extracellular | 98.4 | 98.4 |
| CDY72537 | Canola | plastid | 26.0 | 57.52 |
| AT5G14920.1 | Thale cress | extracellular | 56.0 | 50.91 |
| CDX73193 | Canola | extracellular | 18.4 | 46.94 |
| CDY47499 | Canola | extracellular | 18.4 | 46.94 |
| CDY30303 | Canola | extracellular | 18.8 | 46.53 |
| CDY68406 | Canola | extracellular | 18.0 | 45.92 |
| CDY13540 | Canola | extracellular | 18.0 | 45.92 |
| GSMUA_Achr7P19950_001 | Banana | extracellular | 21.2 | 45.69 |
| CDY65245 | Canola | extracellular | 18.0 | 45.45 |
| CDX85912 | Canola | extracellular | 17.6 | 44.9 |
| CDY39057 | Canola | extracellular | 17.6 | 44.9 |
| CDY44046 | Canola | extracellular | 17.6 | 44.9 |
| Bra006273.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane, plastid | 43.2 | 42.19 |
| TraesCS2B01G346900.1 | Wheat | extracellular | 18.0 | 42.06 |
| TraesCS2D01G327800.1 | Wheat | extracellular | 17.2 | 40.19 |
| Os04t0465300-01 | Rice | extracellular | 16.8 | 40.0 |
| CDX90726 | Canola | extracellular | 15.6 | 39.39 |
| TraesCS2A01G319900.1 | Wheat | extracellular | 16.8 | 39.25 |
| TraesCS2A01G333600.1 | Wheat | extracellular | 16.8 | 39.25 |
| KRG93396 | Soybean | extracellular | 30.8 | 38.89 |
| CDY05065 | Canola | extracellular | 15.6 | 38.61 |
| OQU81731 | Sorghum | extracellular | 16.8 | 37.5 |
| KRH18589 | Soybean | extracellular | 25.6 | 35.16 |
| Zm00001d003380_P001 | Maize | extracellular | 15.6 | 33.91 |
| CDY43288 | Canola | extracellular | 16.0 | 33.33 |
| CDY04794 | Canola | extracellular | 16.0 | 33.33 |
| CDY21382 | Canola | extracellular | 15.6 | 32.5 |
| VIT_14s0066g01790.t01 | Wine grape | cytosol | 35.6 | 29.87 |
Protein Annotations
| EnsemblPlants:CDY09898 | EnsemblPlantsGene:GSBRNA2T00031658001 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF18 | PFAM:PF02704 |
| PRINTS:PR01217 | ProteinID:CDY09898 | ProteinID:CDY09898.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EE2927 |
| UniProt:A0A078FCW7 | MapMan:11.10.2.1.1 | : | : | : | : |
Description
BnaC09g42630DBnaC09g42630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCW7]
Coordinates
chrLK031999:+:900302..901724
Molecular Weight (calculated)
26547.8 Da
IEP (calculated)
10.684
GRAVY (calculated)
-0.486
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSLLSVFI FLQVFRNIVF AASNEESKIS VPPSPSYKPS PPLVKPSTLP TTPIKPPTTT PPVKSPATPV TPTKPPVKSY PPQVKPPTSP LVKPPTYKPP
101: TPTVKPPTKP PVQPPTYKPP TPLVKPPSIP PVKPPTAPVK PTPTTPVTTP PPVKPPVNPI PSPPVNAPPV KPPTPPAKPP TPPPVRTRID CVSLCGTRCG
201: QHSRQNVCTR ACVTCCYRCK CVPPGTYGNK EKCGSCYANM KTRGGRPKCP
101: TPTVKPPTKP PVQPPTYKPP TPLVKPPSIP PVKPPTAPVK PTPTTPVTTP PPVKPPVNPI PSPPVNAPPV KPPTPPAKPP TPPPVRTRID CVSLCGTRCG
201: QHSRQNVCTR ACVTCCYRCK CVPPGTYGNK EKCGSCYANM KTRGGRPKCP
001: MALSLLSVFI FFHVFTNVVF AASNEESNAL VSLPTPTLPS PSPATKPPSP ALKPPTPSYK PPTLPTTPIK PPTTKPPVKP PTIPVTPVKP PVSTPPIKLP
101: PVQPPTYKPP TPTVKPPSVQ PPTYKPPTPT VKPPTTSPVK PPTTPPVQSP PVQPPTYKPP TSPVKPPTTT PPVKPPTTTP PVQPPTYNPP TTPVKPPTAP
201: PVKPPTPPPV RTRIDCVPLC GTRCGQHSRK NVCMRACVTC CYRCKCVPPG TYGNKEKCGS CYANMKTRGG KSKCP
101: PVQPPTYKPP TPTVKPPSVQ PPTYKPPTPT VKPPTTSPVK PPTTPPVQSP PVQPPTYKPP TSPVKPPTTT PPVKPPTTTP PVQPPTYNPP TTPVKPPTAP
201: PVKPPTPPPV RTRIDCVPLC GTRCGQHSRK NVCMRACVTC CYRCKCVPPG TYGNKEKCGS CYANMKTRGG KSKCP
Arabidopsis Description
GASA14Gibberellin-regulated protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFR3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.