Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90726 | Canola | extracellular | 92.08 | 93.94 |
| AT4G09600.1 | Thale cress | extracellular | 82.18 | 83.84 |
| AT4G09610.1 | Thale cress | extracellular | 78.22 | 79.8 |
| HORVU1Hr1G074530.1 | Barley | extracellular | 49.51 | 54.35 |
| TraesCS1A01G270100.1 | Wheat | extracellular | 47.52 | 52.17 |
| CDX73193 | Canola | extracellular | 49.51 | 51.02 |
| CDY47499 | Canola | extracellular | 49.51 | 51.02 |
| CDY30303 | Canola | extracellular | 50.49 | 50.49 |
| CDX85912 | Canola | extracellular | 48.51 | 50.0 |
| CDY13540 | Canola | extracellular | 48.51 | 50.0 |
| Os05t0432200-00 | Rice | extracellular | 45.54 | 50.0 |
| CDY39057 | Canola | extracellular | 48.51 | 50.0 |
| PGSC0003DMT400004046 | Potato | extracellular | 51.49 | 50.0 |
| CDY44046 | Canola | extracellular | 48.51 | 50.0 |
| Solyc01g111080.2.1 | Tomato | nucleus | 51.49 | 50.0 |
| CDY68406 | Canola | extracellular | 48.51 | 50.0 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 47.52 | 48.98 |
| TraesCS1D01G270100.1 | Wheat | extracellular | 44.55 | 48.91 |
| TraesCS1D01G270300.1 | Wheat | extracellular | 44.55 | 48.91 |
| KRH05956 | Soybean | extracellular | 47.52 | 48.48 |
| KRH17433 | Soybean | extracellular | 47.52 | 48.48 |
| EES13089 | Sorghum | extracellular | 52.48 | 47.75 |
| CDY65245 | Canola | extracellular | 46.53 | 47.47 |
| Zm00001d010193_P001 | Maize | extracellular | 43.56 | 46.81 |
| KRH51705 | Soybean | extracellular | 44.55 | 45.0 |
| EES18282 | Sorghum | extracellular | 41.58 | 44.21 |
| KXG21918 | Sorghum | extracellular | 41.58 | 43.75 |
| KRH61042 | Soybean | extracellular | 41.58 | 42.0 |
| HORVU1Hr1G074580.1 | Barley | extracellular | 45.54 | 39.32 |
| CDY21382 | Canola | extracellular | 39.6 | 33.33 |
| CDY72537 | Canola | plastid | 35.64 | 31.86 |
| CDY43288 | Canola | extracellular | 37.62 | 31.67 |
| CDY04794 | Canola | extracellular | 37.62 | 31.67 |
| CDY31392 | Canola | extracellular | 38.61 | 15.6 |
| CDY09898 | Canola | extracellular | 38.61 | 15.6 |
Protein Annotations
| EnsemblPlants:CDY05065 | EnsemblPlantsGene:GSBRNA2T00119824001 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF2 | PFAM:PF02704 |
| ProteinID:CDY05065 | ProteinID:CDY05065.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0001CA9F33 | MapMan:11.10.2.1.1 |
Description
BnaC03g28630D
Coordinates
chrLK031959:-:384804..385788
Molecular Weight (calculated)
10998.5 Da
IEP (calculated)
8.504
GRAVY (calculated)
-0.013
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIFRATLLM LLILVCLTTY ELHVHASEGA EAESREGAVK IDCSGRCKGR CNKSSRPNLC LRACNSCCFR CNCVPPGTHG NHHLCPCYAS ITTRGGRLKC
101: P
101: P
1: MAIFRSTLVL LLILFCLTTF ELHVHAAEDS QVGEGVVKID CGGRCKGRCS KSSRPNLCLR ACNSCCYRCN CVPPGTAGNH HLCPCYASIT TRGGRLKCP
Arabidopsis Description
GASA3Gibberellin-regulated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P46687]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.