Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G09600.1 | Thale cress | extracellular | 84.85 | 84.85 |
| CDX90726 | Canola | extracellular | 82.83 | 82.83 |
| CDY05065 | Canola | extracellular | 79.8 | 78.22 |
| AT2G18420.1 | Thale cress | extracellular | 51.52 | 54.26 |
| HORVU1Hr1G074530.1 | Barley | extracellular | 49.49 | 53.26 |
| TraesCS1A01G270100.1 | Wheat | extracellular | 48.48 | 52.17 |
| Os05t0432200-00 | Rice | extracellular | 48.48 | 52.17 |
| EES18282 | Sorghum | extracellular | 48.48 | 50.53 |
| Solyc01g111080.2.1 | Tomato | nucleus | 52.53 | 50.0 |
| PGSC0003DMT400004046 | Potato | extracellular | 52.53 | 50.0 |
| KRH51705 | Soybean | extracellular | 50.51 | 50.0 |
| KXG21918 | Sorghum | extracellular | 48.48 | 50.0 |
| KRH05956 | Soybean | extracellular | 49.49 | 49.49 |
| KRH17433 | Soybean | extracellular | 49.49 | 49.49 |
| AT1G75750.1 | Thale cress | extracellular | 48.48 | 48.98 |
| TraesCS1D01G270100.1 | Wheat | extracellular | 45.45 | 48.91 |
| TraesCS1D01G270300.1 | Wheat | extracellular | 45.45 | 48.91 |
| KRH61042 | Soybean | extracellular | 48.48 | 48.0 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 47.47 | 47.96 |
| Zm00001d010193_P001 | Maize | extracellular | 45.45 | 47.87 |
| EES13089 | Sorghum | extracellular | 49.49 | 44.14 |
| HORVU1Hr1G074580.1 | Barley | extracellular | 46.46 | 39.32 |
| AT1G22690.1 | Thale cress | extracellular | 46.46 | 38.66 |
| AT5G14920.1 | Thale cress | extracellular | 36.36 | 13.09 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:826546 | UniProt:A0A178V0X0 | ProteinID:AEE82771.1 | ArrayExpress:AT4G09610 | EnsemblPlantsGene:AT4G09610 |
| RefSeq:AT4G09610 | TAIR:AT4G09610 | RefSeq:AT4G09610-TAIR-G | EnsemblPlants:AT4G09610.1 | TAIR:AT4G09610.1 | Unigene:At.4230 |
| ProteinID:CAB78084.1 | ProteinID:CAB82128.1 | InterPro:GASA | Symbol:GASA2 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 |
| RefSeq:NP_192699.1 | ProteinID:OAO97811.1 | ProteinID:OAO99976.1 | UniProt:P46688 | PFAM:PF02704 | PANTHER:PTHR23201 |
| PANTHER:PTHR23201:SF12 | SignalP:SignalP-noTM | EMBL:U11765 | UniParc:UPI000004A1C8 | SEG:seg | : |
Description
GASA2Gibberellin-regulated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P46688]
Coordinates
chr4:-:6074770..6075645
Molecular Weight (calculated)
10532.0 Da
IEP (calculated)
8.623
GRAVY (calculated)
0.175
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MAVFRSTLVL LLIIVCLTTY ELHVHAADGA KVGEGVVKID CGGRCKDRCS KSSRTKLCLR ACNSCCSRCN CVPPGTSGNT HLCPCYASIT THGGRLKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.