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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G270100.1 Wheat extracellular 92.39 92.39
KXG21918 Sorghum extracellular 65.22 62.5
HORVU1Hr1G074580.1 Barley extracellular 76.09 59.83
Os05t0432200-00 Rice extracellular 59.78 59.78
Zm00001d010193_P001 Maize extracellular 60.87 59.57
EES18282 Sorghum extracellular 60.87 58.95
Bra008222.1-P Field mustard extracellular 55.43 52.04
CDY44046 Canola extracellular 55.43 52.04
CDY39057 Canola extracellular 55.43 52.04
CDY13540 Canola extracellular 55.43 52.04
AT4G09600.1 Thale cress extracellular 55.43 51.52
AT2G18420.1 Thale cress extracellular 52.17 51.06
CDY47499 Canola extracellular 54.35 51.02
CDX73193 Canola extracellular 54.35 51.02
KRH17433 Soybean extracellular 54.35 50.51
CDX90726 Canola extracellular 54.35 50.51
KRH05956 Soybean extracellular 54.35 50.51
CDX85912 Canola extracellular 53.26 50.0
CDY05065 Canola extracellular 54.35 49.51
CDY30303 Canola extracellular 54.35 49.51
Bra029227.1-P Field mustard extracellular 53.26 49.49
AT4G09610.1 Thale cress extracellular 53.26 49.49
CDY68406 Canola extracellular 52.17 48.98
VIT_18s0001g14270.t01 Wine grape extracellular 52.17 48.98
AT1G75750.1 Thale cress extracellular 52.17 48.98
Bra038550.1-P Field mustard extracellular 53.26 48.51
CDY65245 Canola extracellular 51.09 47.47
PGSC0003DMT400004046 Potato extracellular 50.0 44.23
Solyc01g111080.2.1 Tomato nucleus 50.0 44.23
KRH51705 Soybean extracellular 47.83 44.0
KRH61042 Soybean extracellular 46.74 43.0
Protein Annotations
EnsemblPlants:HORVU1Hr1G074530.1EnsemblPlantsGene:HORVU1Hr1G074530InterPro:GASAPANTHER:PTHR23201PANTHER:PTHR23201:SF12PFAM:PF02704
SEG:segSignalP:SignalP-noTMUniParc:UPI000B479E49UniProt:A0A287G8Z9MapMan:11.10.2.1.1:
Description
No Description!
Coordinates
chrchr1H:+:508283184..508284948
Molecular Weight (calculated)
9694.8 Da
IEP (calculated)
8.254
GRAVY (calculated)
-0.001
Length
92 amino acids
Sequence
(BLAST)
1: MAGKARVFMC VALVVLLLLV ETTAPRGQAD AVDCGGACSY RCSKSSRPNL CGRACNTCCR RCGCVPPGTA GNEDVCPCYA HMTTHDGRHK CP
Best Arabidopsis Sequence Match ( AT4G09600.1 )
(BLAST)
1: MAIFRSTLVL LLILFCLTTF ELHVHAAEDS QVGEGVVKID CGGRCKGRCS KSSRPNLCLR ACNSCCYRCN CVPPGTAGNH HLCPCYASIT TRGGRLKCP
Arabidopsis Description
GASA3Gibberellin-regulated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P46687]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.