Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47499 | Canola | extracellular | 69.15 | 66.33 |
| CDX73193 | Canola | extracellular | 69.15 | 66.33 |
| AT1G75750.1 | Thale cress | extracellular | 68.09 | 65.31 |
| CDY44046 | Canola | extracellular | 68.09 | 65.31 |
| CDY39057 | Canola | extracellular | 68.09 | 65.31 |
| CDY13540 | Canola | extracellular | 68.09 | 65.31 |
| Bra008222.1-P | Field mustard | extracellular | 68.09 | 65.31 |
| CDY68406 | Canola | extracellular | 67.02 | 64.29 |
| Bra038550.1-P | Field mustard | extracellular | 68.09 | 63.37 |
| CDY30303 | Canola | extracellular | 68.09 | 63.37 |
| CDX85912 | Canola | extracellular | 65.96 | 63.27 |
| CDY65245 | Canola | extracellular | 65.96 | 62.63 |
| Bra029227.1-P | Field mustard | extracellular | 64.89 | 61.62 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 61.7 | 59.18 |
| Solyc01g111080.2.1 | Tomato | nucleus | 62.77 | 56.73 |
| KRH17433 | Soybean | extracellular | 59.57 | 56.57 |
| KRH05956 | Soybean | extracellular | 59.57 | 56.57 |
| PGSC0003DMT400004046 | Potato | extracellular | 61.7 | 55.77 |
| KRH51705 | Soybean | extracellular | 58.51 | 55.0 |
| KRH61042 | Soybean | extracellular | 57.45 | 54.0 |
| TraesCS1A01G270100.1 | Wheat | extracellular | 52.13 | 53.26 |
| HORVU1Hr1G074530.1 | Barley | extracellular | 51.06 | 52.17 |
| AT4G09600.1 | Thale cress | extracellular | 54.26 | 51.52 |
| AT4G09610.1 | Thale cress | extracellular | 54.26 | 51.52 |
| TraesCS1D01G270100.1 | Wheat | extracellular | 48.94 | 50.0 |
| TraesCS1D01G270300.1 | Wheat | extracellular | 48.94 | 50.0 |
| Zm00001d010193_P001 | Maize | extracellular | 50.0 | 50.0 |
| KXG21918 | Sorghum | extracellular | 50.0 | 48.96 |
| Os05t0432200-00 | Rice | extracellular | 47.87 | 48.91 |
| EES18282 | Sorghum | extracellular | 47.87 | 47.37 |
| EES13089 | Sorghum | extracellular | 54.26 | 45.95 |
| AT1G22690.1 | Thale cress | extracellular | 47.87 | 37.82 |
| HORVU1Hr1G074580.1 | Barley | extracellular | 46.81 | 37.61 |
| AT5G14920.1 | Thale cress | extracellular | 45.74 | 15.64 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:816357 | ProteinID:AAD15495.1 | ProteinID:AEC06768.1 | ArrayExpress:AT2G18420 | EnsemblPlantsGene:AT2G18420 |
| RefSeq:AT2G18420 | TAIR:AT2G18420 | RefSeq:AT2G18420-TAIR-G | EnsemblPlants:AT2G18420.1 | TAIR:AT2G18420.1 | Unigene:At.52804 |
| UniProt:F4IQJ4 | InterPro:GASA | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009740 | GO:GO:0009987 | RefSeq:NP_179433.2 | PFAM:PF02704 |
| PO:PO:0001185 | PO:PO:0007611 | PO:PO:0009009 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0020090 | PO:PO:0025022 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF41 | SignalP:SignalP-noTM | UniParc:UPI0001505879 |
| SEG:seg | : | : | : | : | : |
Description
GASA11Gibberellin-regulated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:F4IQJ4]
Coordinates
chr2:+:7993801..7994554
Molecular Weight (calculated)
10155.4 Da
IEP (calculated)
8.304
GRAVY (calculated)
0.013
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MAVFRVLLAS LLISLLVLDF VHADMVTSND APKIDCNSRC QERCSLSSRP NLCHRACGTC CARCNCVAPG TSGNYDKCPC YGSLTTHGGR RKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.