Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90726 | Canola | extracellular | 85.86 | 85.86 |
| AT4G09610.1 | Thale cress | extracellular | 84.85 | 84.85 |
| CDY05065 | Canola | extracellular | 83.84 | 82.18 |
| HORVU1Hr1G074530.1 | Barley | extracellular | 51.52 | 55.43 |
| TraesCS1A01G270100.1 | Wheat | extracellular | 50.51 | 54.35 |
| AT2G18420.1 | Thale cress | extracellular | 51.52 | 54.26 |
| AT1G75750.1 | Thale cress | extracellular | 51.52 | 52.04 |
| KRH17433 | Soybean | extracellular | 51.52 | 51.52 |
| KRH05956 | Soybean | extracellular | 51.52 | 51.52 |
| TraesCS1D01G270100.1 | Wheat | extracellular | 47.47 | 51.09 |
| TraesCS1D01G270300.1 | Wheat | extracellular | 47.47 | 51.09 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 50.51 | 51.02 |
| Os05t0432200-00 | Rice | extracellular | 46.46 | 50.0 |
| PGSC0003DMT400004046 | Potato | extracellular | 52.53 | 50.0 |
| Solyc01g111080.2.1 | Tomato | nucleus | 52.53 | 50.0 |
| KRH51705 | Soybean | extracellular | 49.49 | 49.0 |
| EES13089 | Sorghum | extracellular | 54.55 | 48.65 |
| EES18282 | Sorghum | extracellular | 46.46 | 48.42 |
| KXG21918 | Sorghum | extracellular | 46.46 | 47.92 |
| Zm00001d010193_P001 | Maize | extracellular | 44.44 | 46.81 |
| KRH61042 | Soybean | extracellular | 46.46 | 46.0 |
| HORVU1Hr1G074580.1 | Barley | extracellular | 48.48 | 41.03 |
| AT1G22690.1 | Thale cress | extracellular | 45.45 | 37.82 |
| AT5G14920.1 | Thale cress | extracellular | 39.39 | 14.18 |
Protein Annotations
| MapMan:11.10.2.1.1 | EntrezGene:826545 | ProteinID:AEE82770.1 | ArrayExpress:AT4G09600 | EnsemblPlantsGene:AT4G09600 | RefSeq:AT4G09600 |
| TAIR:AT4G09600 | RefSeq:AT4G09600-TAIR-G | EnsemblPlants:AT4G09600.1 | TAIR:AT4G09600.1 | EMBL:AY052302 | Unigene:At.24572 |
| ProteinID:CAB78083.1 | ProteinID:CAB82127.1 | InterPro:GASA | Symbol:GASA3 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009740 |
| GO:GO:0009987 | RefSeq:NP_192698.1 | UniProt:P46687 | PFAM:PF02704 | PO:PO:0007115 | PO:PO:0009001 |
| PO:PO:0009010 | PO:PO:0009025 | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF12 | SignalP:SignalP-noTM | EMBL:U11764 |
| UniParc:UPI0000000D66 | SEG:seg | : | : | : | : |
Description
GASA3Gibberellin-regulated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P46687]
Coordinates
chr4:-:6072804..6073646
Molecular Weight (calculated)
10705.2 Da
IEP (calculated)
8.503
GRAVY (calculated)
0.154
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MAIFRSTLVL LLILFCLTTF ELHVHAAEDS QVGEGVVKID CGGRCKGRCS KSSRPNLCLR ACNSCCYRCN CVPPGTAGNH HLCPCYASIT TRGGRLKCP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.