Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21382 | Canola | extracellular | 100.0 | 100.0 |
| CDY04794 | Canola | extracellular | 97.5 | 97.5 |
| CDY43288 | Canola | extracellular | 97.5 | 97.5 |
| AT1G22690.1 | Thale cress | extracellular | 70.0 | 70.59 |
| Solyc11g017440.1.1 | Tomato | extracellular, nucleus | 44.17 | 51.46 |
| PGSC0003DMT400023914 | Potato | extracellular | 43.33 | 50.49 |
| VIT_18s0072g01110.t01 | Wine grape | extracellular | 46.67 | 50.0 |
| Bra029227.1-P | Field mustard | extracellular | 40.83 | 49.49 |
| Bra008222.1-P | Field mustard | extracellular | 40.0 | 48.98 |
| Bra038550.1-P | Field mustard | extracellular | 40.0 | 47.52 |
| KRH37871 | Soybean | extracellular | 37.5 | 40.18 |
| Bra006273.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane, plastid | 32.5 | 15.23 |
Protein Annotations
Description
AT1G22690 (E=2e-043) | gibberellin-responsive protein, putative
Coordinates
chrA09:-:24582390..24583002
Molecular Weight (calculated)
13187.9 Da
IEP (calculated)
8.819
GRAVY (calculated)
-0.324
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKMKVVAFV MLISLLLLSQ VLADLSSSSN AETSSASQIQ TNEENQVEAF KRTYHHRPPF NCGYACARRC RETSRKKVCY RACGSCCAKC QCVPPGTSGN
101: TASCPCYANL RTHGNKLKCP
101: TASCPCYANL RTHGNKLKCP
001: MKKMNVVAFV TLIISFLLLS QVLAELSSSS NNETSSVSQT NDENQTAAFK RTYHHRPRIN CGHACARRCS KTSRKKVCHR ACGSCCAKCQ CVPPGTSGNT
101: ASCPCYASIR THGNKLKCP
101: ASCPCYASIR THGNKLKCP
Arabidopsis Description
GASA9Gibberellin-regulated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.