Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g017440.1.1 | Tomato | extracellular, nucleus | 54.46 | 59.22 |
| PGSC0003DMT400023914 | Potato | extracellular | 53.57 | 58.25 |
| KRH37871 | Soybean | extracellular | 51.79 | 51.79 |
| VIT_18s0072g01120.t01 | Wine grape | mitochondrion | 32.14 | 48.65 |
| AT1G22690.1 | Thale cress | extracellular | 50.89 | 47.9 |
| Bra024530.1-P | Field mustard | extracellular | 50.0 | 46.67 |
| CDY21382 | Canola | extracellular | 50.0 | 46.67 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 40.18 | 45.92 |
| CDY04794 | Canola | extracellular | 48.21 | 45.0 |
| CDY43288 | Canola | extracellular | 48.21 | 45.0 |
| VIT_01s0026g00620.t01 | Wine grape | extracellular | 41.96 | 43.52 |
| VIT_14s0066g01790.t01 | Wine grape | cytosol | 39.29 | 14.77 |
Protein Annotations
| EntrezGene:100247045 | wikigene:100247045 | MapMan:11.10.2.1.1 | ProteinID:CBI18167 | ProteinID:CBI18167.3 | UniProt:D7SR86 |
| EMBL:FN594968 | InterPro:GASA | EntrezGene:LOC100247045 | wikigene:LOC100247045 | PFAM:PF02704 | PANTHER:PTHR23201 |
| PANTHER:PTHR23201:SF20 | SignalP:SignalP-noTM | TIGR:TC52358 | TIGR:TC71176 | UniParc:UPI00015CB4D1 | ArrayExpress:VIT_18s0072g01110 |
| EnsemblPlantsGene:VIT_18s0072g01110 | EnsemblPlants:VIT_18s0072g01110.t01 | unigene:Vvi.3907 | RefSeq:XP_002272568 | RefSeq:XP_002272568.1 | SEG:seg |
Description
No Description!
Coordinates
chr18:+:20718884..20720078
Molecular Weight (calculated)
12501.4 Da
IEP (calculated)
9.708
GRAVY (calculated)
-0.316
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLFSVFIIS ILLLQAFAEA SLVISNAEHS LTSVDESRDE VALHKKSHPR KINCSYACSR RCRKASRKNV CSRACKTCCK RCHCVPPGTY GNKNMCPCYA
101: SLKTHGHKPK CP
101: SLKTHGHKPK CP
001: MKKMNVVAFV TLIISFLLLS QVLAELSSSS NNETSSVSQT NDENQTAAFK RTYHHRPRIN CGHACARRCS KTSRKKVCHR ACGSCCAKCQ CVPPGTSGNT
101: ASCPCYASIR THGNKLKCP
101: ASCPCYASIR THGNKLKCP
Arabidopsis Description
GASA9Gibberellin-regulated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.