Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 2
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34969 | Soybean | extracellular | 64.86 | 50.0 |
| KRH34971 | Soybean | extracellular | 58.11 | 44.79 |
| KRG91811 | Soybean | extracellular | 58.11 | 44.33 |
| GSMUA_Achr6P18820_001 | Banana | extracellular | 51.35 | 42.7 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 51.35 | 38.78 |
| VIT_01s0026g00620.t01 | Wine grape | extracellular | 48.65 | 33.33 |
| VIT_18s0072g01110.t01 | Wine grape | extracellular | 48.65 | 32.14 |
| VIT_14s0066g01790.t01 | Wine grape | cytosol | 47.3 | 11.74 |
Protein Annotations
| ArrayExpress:VIT_18s0072g01120 | EMBL:FN594968 | EnsemblPlants:VIT_18s0072g01120.t01 | EnsemblPlantsGene:VIT_18s0072g01120 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF12 | PFAM:PF02704 | ProteinID:CBI18166 |
| ProteinID:CBI18166.3 | UniParc:UPI0001BE1536 | UniProt:D7SR85 | MapMan:11.10.2.1.1 | : | : |
Description
No Description!
Coordinates
chr18:-:20720304..20720676
Molecular Weight (calculated)
8234.1 Da
IEP (calculated)
8.690
GRAVY (calculated)
-0.376
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MQVLFNSIKL YKLSDCKSKC AYRCSKAGWH KLCLRACNTC CERCNCVPPG TAGNEDVCPC YAKMTTHGGR HKCP
1: MAIFRSTLVL LLILFCLTTF ELHVHAAEDS QVGEGVVKID CGGRCKGRCS KSSRPNLCLR ACNSCCYRCN CVPPGTAGNH HLCPCYASIT TRGGRLKCP
Arabidopsis Description
GASA3Gibberellin-regulated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P46687]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.