Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g017440.1.1 | Tomato | extracellular, nucleus | 95.15 | 95.15 |
| VIT_18s0072g01110.t01 | Wine grape | extracellular | 58.25 | 53.57 |
| PGSC0003DMT400004046 | Potato | extracellular | 49.51 | 49.04 |
| KRH37871 | Soybean | extracellular | 49.51 | 45.54 |
| AT1G22690.1 | Thale cress | extracellular | 50.49 | 43.7 |
| Bra024530.1-P | Field mustard | extracellular | 50.49 | 43.33 |
| CDY21382 | Canola | extracellular | 50.49 | 43.33 |
| CDY04794 | Canola | extracellular | 48.54 | 41.67 |
| CDY43288 | Canola | extracellular | 48.54 | 41.67 |
| PGSC0003DMT400009367 | Potato | extracellular | 40.78 | 40.78 |
| PGSC0003DMT400009368 | Potato | extracellular | 36.89 | 37.25 |
| PGSC0003DMT400040298 | Potato | extracellular | 32.04 | 36.67 |
| PGSC0003DMT400075426 | Potato | extracellular | 39.81 | 36.28 |
| PGSC0003DMT400062877 | Potato | extracellular | 41.75 | 30.07 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400023914 | EnsemblPlantsGene:PGSC0003DMG400009244 | EntrezGene:102586393 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF20 |
| PFAM:PF02704 | PGSC:PGSC0003DMG400009244 | RefSeq:XP_006351146.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000296B34D |
| UniProt:M1AJ54 | MapMan:11.10.2.1.1 | : | : | : | : |
Description
Gibberellin-regulated protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400009244]
Coordinates
chr11:+:8645057..8646757
Molecular Weight (calculated)
11498.5 Da
IEP (calculated)
10.165
GRAVY (calculated)
-0.200
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTFTLFLIF ILLIQVLSNA AAEQIEAGNE GALHKKIHPI KRIHCGYACA RRCKKSSRKK VCMRACKTCC ARCKCVPPGT YGNKEVCPCY ARLKTHGNKP
101: KCP
101: KCP
001: MKKMNVVAFV TLIISFLLLS QVLAELSSSS NNETSSVSQT NDENQTAAFK RTYHHRPRIN CGHACARRCS KTSRKKVCHR ACGSCCAKCQ CVPPGTSGNT
101: ASCPCYASIR THGNKLKCP
101: ASCPCYASIR THGNKLKCP
Arabidopsis Description
GASA9Gibberellin-regulated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.