Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g089300.1.1 | Tomato | extracellular | 69.03 | 69.64 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 42.48 | 48.98 |
| PGSC0003DMT400004046 | Potato | extracellular | 42.48 | 46.15 |
| PGSC0003DMT400009368 | Potato | extracellular | 37.17 | 41.18 |
| PGSC0003DMT400023914 | Potato | extracellular | 36.28 | 39.81 |
| PGSC0003DMT400040298 | Potato | extracellular | 30.97 | 38.89 |
| PGSC0003DMT400009367 | Potato | extracellular | 35.4 | 38.84 |
| PGSC0003DMT400062877 | Potato | extracellular | 39.82 | 31.47 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400075426 | EnsemblPlantsGene:PGSC0003DMG400029338 | EntrezGene:102588973 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF2 |
| PFAM:PF02704 | PGSC:PGSC0003DMG400029338 | RefSeq:XP_006342570.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000296991C |
| UniProt:M1CV60 | MapMan:11.10.2.1.1 | : | : | : | : |
Description
GAST [Source:PGSC_GENE;Acc:PGSC0003DMG400029338]
Coordinates
chr12:-:57095737..57097720
Molecular Weight (calculated)
12109.6 Da
IEP (calculated)
6.462
GRAVY (calculated)
-0.036
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISKFLLVT MVLISLFVFC LVEADDDGGD GDNQVVYTAG PEGANNPTYI PTSECGTACE ARCSLASRHK MCLRACGTCC TRCNCVPPGT SGNQDLCPCY
101: RDMLTHHGKH KCP
101: RDMLTHHGKH KCP
1: MAISKALIAS LLISLLVLQL VQADVENSQK KNGYAKKIDC GSACVARCRL SRRPRLCHRA CGTCCYRCNC VPPGTYGNYD KCQCYASLTT HGGRRKCP
Arabidopsis Description
GASA1GASA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4S5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.