Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g083870.2.1 | Tomato | extracellular | 93.14 | 93.14 |
| PGSC0003DMT400009367 | Potato | extracellular | 71.57 | 70.87 |
| KRH69786 | Soybean | cytosol | 34.31 | 51.47 |
| PGSC0003DMT400004046 | Potato | extracellular | 51.96 | 50.96 |
| PGSC0003DMT400040298 | Potato | extracellular | 37.25 | 42.22 |
| PGSC0003DMT400075426 | Potato | extracellular | 41.18 | 37.17 |
| PGSC0003DMT400023914 | Potato | extracellular | 37.25 | 36.89 |
| PGSC0003DMT400062877 | Potato | extracellular | 45.1 | 32.17 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400009368 | EnsemblPlantsGene:PGSC0003DMG400003642 | EntrezGene:102589718 | EntrezGene:102599648 | InterPro:GASA | PANTHER:PTHR23201 |
| PANTHER:PTHR23201:SF2 | PFAM:PF02704 | PGSC:PGSC0003DMG400003642 | RefSeq:XP_006340736.1 | RefSeq:XP_006340940.1 | SignalP:SignalP-noTM |
| UniParc:UPI000296F35F | UniProt:M0ZW45 | MapMan:11.10.2.1.1 | : | : | : |
Description
Gast1 [Source:PGSC_GENE;Acc:PGSC0003DMG400003642]
Coordinates
chr2:+:39375243..39375935
Molecular Weight (calculated)
11176.4 Da
IEP (calculated)
8.428
GRAVY (calculated)
-0.208
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFQKAFAAM LIASFLLVHF AYAQKVDYSK PPASAPQGPQ PLDCIGACKY RCSESSRQNL CNRACGSCCQ RCHCVPPGTS GNYEACPCYF NLLTHNTTRK
101: CP
101: CP
1: MAVFRVLLAS LLISLLVLDF VHADMVTSND APKIDCNSRC QERCSLSSRP NLCHRACGTC CARCNCVAPG TSGNYDKCPC YGSLTTHGGR RKCP
Arabidopsis Description
GASA11Gibberellin-regulated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:F4IQJ4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.