Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g006160.2.1 | Tomato | mitochondrion | 46.67 | 65.62 |
| VIT_01s0026g00620.t01 | Wine grape | extracellular | 61.11 | 50.93 |
| KRH57027 | Soybean | extracellular | 64.44 | 50.43 |
| KRH63474 | Soybean | extracellular, nucleus | 61.11 | 47.01 |
| KRH03355 | Soybean | extracellular | 58.89 | 46.09 |
| KRH54442 | Soybean | nucleus | 50.0 | 43.69 |
| PGSC0003DMT400009368 | Potato | extracellular | 42.22 | 37.25 |
| PGSC0003DMT400009367 | Potato | extracellular | 40.0 | 34.95 |
| PGSC0003DMT400004046 | Potato | extracellular | 38.89 | 33.65 |
| PGSC0003DMT400023914 | Potato | extracellular | 36.67 | 32.04 |
| PGSC0003DMT400062877 | Potato | extracellular | 50.0 | 31.47 |
| PGSC0003DMT400075426 | Potato | extracellular | 38.89 | 30.97 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400040298 | EnsemblPlantsGene:PGSC0003DMG400015602 | EntrezGene:102602866 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF18 |
| PFAM:PF02704 | PGSC:PGSC0003DMG400015602 | RefSeq:XP_015168094.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0002951672 |
| UniProt:M1B9P1 | MapMan:11.10.2.1.1 | : | : | : | : |
Description
Gibberellin-regulated protein 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400015602]
Coordinates
chr5:+:7176793..7178616
Molecular Weight (calculated)
10202.6 Da
IEP (calculated)
8.506
GRAVY (calculated)
0.097
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSRLLILFT FFLFCLLVQV SSDIDIEDHQ NQVVRGGNRR LLPYVDCGGL CKVRCSRHSR PNLCSRACGT CCMRCKCVPP GTFGNREICW
1: MAIFRSTLVL LLILFCLTTF ELHVHAAEDS QVGEGVVKID CGGRCKGRCS KSSRPNLCLR ACNSCCYRCN CVPPGTAGNH HLCPCYASIT TRGGRLKCP
Arabidopsis Description
GASA3Gibberellin-regulated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P46687]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.