Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075426 | Potato | extracellular | 69.64 | 69.03 |
| Solyc05g006160.2.1 | Tomato | mitochondrion | 33.93 | 59.38 |
| VIT_18s0001g14270.t01 | Wine grape | extracellular | 41.07 | 46.94 |
| Solyc01g111080.2.1 | Tomato | nucleus | 41.07 | 44.23 |
| Solyc11g017440.1.1 | Tomato | extracellular, nucleus | 39.29 | 42.72 |
| Solyc02g083870.2.1 | Tomato | extracellular | 35.71 | 39.22 |
| Solyc02g083880.2.1 | Tomato | extracellular | 35.71 | 38.84 |
| Solyc03g113910.2.1 | Tomato | extracellular | 39.29 | 30.14 |
Protein Annotations
| EnsemblPlants:Solyc12g089300.1.1 | EnsemblPlantsGene:Solyc12g089300.1 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF2 | PFAM:PF02704 |
| SignalP:SignalP-noTM | UniParc:UPI0001D6B083 | UniProt:K4DH01 | MapMan:11.10.2.1.1 | : | : |
Description
No Description!
Coordinates
chr12:-:64437560..64438996
Molecular Weight (calculated)
11926.5 Da
IEP (calculated)
7.820
GRAVY (calculated)
-0.080
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISKFLLVT MVLISLLVFR PVEANGNGDG DNLAVHTAGP EGANNPTYIP TSECGTACEA RCSLASRHKM CLRACGTCCT RCNCVPPGTS GNQDLCPCYR
101: DMLTHHGKHK CP
101: DMLTHHGKHK CP
1: MAISKALIAS LLISLLVLQL VQADENSQKK NGYAKKIDCG SACVARCRLS RRPRLCHRAC GTCCYRCNCV PPGTYGNYDK CQCYASLTTH GGRRKCP
Arabidopsis Description
GASA1GASA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4S5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.