Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009367 | Potato | extracellular | 90.29 | 90.29 |
| Solyc02g083870.2.1 | Tomato | extracellular | 68.93 | 69.61 |
| Solyc05g006160.2.1 | Tomato | mitochondrion | 37.86 | 60.94 |
| KRH69786 | Soybean | cytosol | 33.98 | 51.47 |
| Solyc01g111080.2.1 | Tomato | nucleus | 49.51 | 49.04 |
| Solyc11g017440.1.1 | Tomato | extracellular, nucleus | 38.84 | 38.84 |
| Solyc12g089300.1.1 | Tomato | extracellular | 38.84 | 35.71 |
| Solyc03g113910.2.1 | Tomato | extracellular | 44.66 | 31.51 |
Protein Annotations
| EnsemblPlants:Solyc02g083880.2.1 | EnsemblPlantsGene:Solyc02g083880.2 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF2 | PFAM:PF02704 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001D6B087 | UniProt:K4BAQ6 | MapMan:11.10.2.1.1 |
Description
No Description!
Coordinates
chr2:+:47137386..47138264
Molecular Weight (calculated)
10995.3 Da
IEP (calculated)
8.692
GRAVY (calculated)
-0.164
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLKGFAAL LIASLVLVHF TYALQEVISG KPPAPSPQPP KPIDCTGSCK TRCSKSSRQN LCNRACGSCC RTCHCVPPGT SGNYEACPCY FNLTTHNSTR
101: KCP
101: KCP
1: MAVFRVLLAS LLISLLVLDF VHADMVTSND APKIDCNSRC QERCSLSSRP NLCHRACGTC CARCNCVAPG TSGNYDKCPC YGSLTTHGGR RKCP
Arabidopsis Description
GASA11Gibberellin-regulated protein 11 [Source:UniProtKB/Swiss-Prot;Acc:F4IQJ4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.