Factsheet for Zm00001d046848_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004494_P001
Zm00001d006366_P001
Zm00001d008930_P003
Zm00001d009724_P009
Zm00001d011352_P001
Zm00001d033961_P001
Zm00001d039362_P002
Zm00001d044479_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62380.1	Zm00001d004494_P001	AT2G42580.1	19000166
AT1G62380.1	Zm00001d006366_P001	AT2G42580.1	19000166
AT1G62380.1	Zm00001d008930_P003	AT2G42580.1	19000166
AT1G62380.1	Zm00001d009724_P009	AT2G42580.1	19000166
AT1G62380.1	Zm00001d011352_P001	AT2G42580.1	19000166
AT1G62380.1	Zm00001d033961_P001	AT2G42580.1	19000166
AT1G62380.1	Zm00001d039362_P002	AT2G42580.1	19000166
AT1G62380.1	Zm00001d044479_P001	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044978_P001	Maize	extracellular	41.92	88.62
Zm00001d005927_P001	Maize	cytosol	59.62	68.58
Zm00001d015860_P001	Maize	cytosol	60.77	67.52
Zm00001d036955_P001	Maize	cytosol	64.23	57.0
KRH73354	Soybean	cytosol	34.62	45.69
VIT_00s2086g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	33.08	41.55
Zm00001d011208_P001	Maize	cytosol	40.77	33.44
KRH14788	Soybean	cytosol	39.23	33.22
KRH73352	Soybean	cytosol	39.23	33.22
KRH14787	Soybean	cytosol	38.85	32.9
KRH14791	Soybean	cytosol	38.46	32.57
KRH41775	Soybean	cytosol	37.31	31.29
KRH73345	Soybean	nucleus	37.69	31.11
Solyc12g005940.1.1	Tomato	cytosol	37.69	31.01
CDY08654	Canola	cytosol	38.08	30.94
CDY12944	Canola	cytosol	38.08	30.94
Bra034504.1-P	Field mustard	cytosol	38.08	30.94
CDY19546	Canola	cytosol	38.08	30.94
Bra027049.1-P	Field mustard	cytosol	38.08	30.94
VIT_12s0059g01380.t01	Wine grape	cytosol	37.69	30.82
PGSC0003DMT400036081	Potato	cytosol	37.31	30.7
Zm00001d020686_P001	Maize	cytosol	38.46	30.67
CDY32039	Canola	cytosol	37.69	30.62
AT1G05010.1	Thale cress	cytosol	37.69	30.34
AT1G62380.1	Thale cress	cytosol	37.31	30.31
Zm00001d024843_P001	Maize	cytosol	36.54	30.25
CDY18281	Canola	cytosol	37.31	30.22
CDY53397	Canola	cytosol	37.31	30.22
Bra015380.1-P	Field mustard	cytosol	37.31	30.22
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	36.92	30.19
KRH14794	Soybean	nucleus	36.54	30.16
Solyc07g049530.2.1	Tomato	nucleus	36.54	30.16
Solyc07g049550.2.1	Tomato	nucleus	36.54	30.06
Zm00001d018211_P001	Maize	extracellular	36.54	29.97
Zm00001d024852_P001	Maize	cytosol	36.15	29.84
Zm00001d024851_P001	Maize	cytosol	36.15	29.84
Zm00001d024850_P001	Maize	cytosol	36.15	29.84
KRH02009	Soybean	cytosol	36.54	29.78
Solyc02g081190.2.1	Tomato	cytosol	36.54	29.69
PGSC0003DMT400043087	Potato	cytosol	36.54	29.69
PGSC0003DMT400055332	Potato	cytosol	36.15	29.47
Bra019734.1-P	Field mustard	cytosol	36.15	29.38
CDY66260	Canola	cytosol	36.15	29.28
CDY34603	Canola	cytosol	36.15	29.28
Bra031798.1-P	Field mustard	cytosol	36.15	29.28
KRH36520	Soybean	cytosol	35.77	29.25
Solyc02g036350.2.1	Tomato	extracellular	35.77	29.15
AT1G12010.1	Thale cress	cytosol	35.77	29.06
KRH11502	Soybean	cytosol	35.38	28.93
Zm00001d004719_P001	Maize	cytosol	34.23	28.71
Zm00001d004718_P001	Maize	cytosol	34.23	28.71
Zm00001d052136_P001	Maize	cytosol	35.38	28.48
Zm00001d000163_P001	Maize	extracellular	33.85	28.11
Zm00001d024853_P001	Maize	plastid	36.54	26.69
KRH73355	Soybean	cytosol	2.69	7.53

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:AQL05117.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:K7VG23	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF04733
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF103	SUPFAM:SSF51197	UniParc:UPI000220E5DD	EnsemblPlantsGene:Zm00001d046848
EnsemblPlants:Zm00001d046848_P001	EnsemblPlants:Zm00001d046848_T001	SEG:seg	:	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase 1

Coordinates

chr9:-:108298093..108299643

Molecular Weight (calculated)

29079.1 Da

IEP (calculated)

9.884

GRAVY (calculated)

-0.173

Length

260 amino acids

Sequence
(BLAST)

001: MASPDLLFNL RNLFYLGAYQ AAINNIDIPG LDAAAAAERD AIVFRSYIAL GSYQVRTHPA SGASAATSLQ VVKLLALYLT GDKRRYVMKK INISKQNDKF
101: QQTAYQEAFS KPSVGVKVAK YPRCSHPELV MGLREHTDAG GIILLFQDEL IPGLEFLKDG RWMAVPPTQG NRIFVNLGDQ IEVITNGTYK SICHRVLPNK
201: NGSRLSIATF YNPGADAIIC PASKRTYPSQ YRFQDYLDFY STTKFTDKVF RFQTTKAILK

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.