CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73354	Soybean	cytosol	61.89	96.45
KRH14791	Soybean	cytosol	92.51	92.51
KRH14788	Soybean	cytosol	91.53	91.53
KRH14787	Soybean	cytosol	91.21	91.21
KRH73355	Soybean	cytosol	26.38	87.1
KRH41775	Soybean	cytosol	87.3	86.45
KRH73345	Soybean	nucleus	80.78	78.73
KRH14794	Soybean	nucleus	80.46	78.41
VIT_12s0059g01380.t01	Wine grape	cytosol	80.13	77.36
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	77.2	74.53
KRH02009	Soybean	cytosol	75.9	73.04
KRH11502	Soybean	cytosol	75.57	72.96
KRH36520	Soybean	cytosol	75.57	72.96
KRH53298	Soybean	nucleus	53.75	53.75
KRH64615	Soybean	cytosol	53.75	53.57
KRH41426	Soybean	cytosol	49.51	49.51
KRH49052	Soybean	cytosol	49.19	49.35
KRH60136	Soybean	endoplasmic reticulum	49.19	49.19
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.22	39.23
Zm00001d044978_P001	Maize	extracellular	6.19	15.45

Protein Annotations

EntrezGene:100815336	MapMan:11.5.1.2	Gene3D:2.60.120.330	EMBL:ACUP02001273	EMBL:BT098907	UniProt:C6TMF5
ncoils:Coil	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_02G268200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH73352
ProteinID:KRH73352	ProteinID:KRH73352.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF193	SUPFAM:SSF51197	UniParc:UPI0001B1723D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:45277440..45279284

Molecular Weight (calculated)

35026.9 Da

IEP (calculated)

4.882

GRAVY (calculated)

-0.398

Length

307 amino acids

Sequence
(BLAST)

001: MENFPVINLD NLNGEERKAT LDQIEDACQN WGFFELVNHG IPLELLDTVE RLTKEHYRKC MENRFKEAVA SKALEVEVKD MDWESTFFLR HLPTSNISEI
101: PDLCQEYRDA MKEFAKKLEE LAEELLDLLC ENLGLEKGYL KNAFYGSKGP NFGTKVANYP ACPKPELVKG LRAHTDAGGI ILLLQDDKVS GLQLLKDGQW
201: VDVPPMRHSI VVNLGDQIEV ITNGRYKSVE HRVVARTDGT RMSVASFYNP ANDAVIYPAP ALLEKEAQET EQVYPKFVFE DYMKLYATLK FQPKEPRFQA
301: IKAVNSF

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.