Factsheet for VIT_12s0059g01380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s2086g00010.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	55.66	85.51
KRH73354	Soybean	cytosol	51.89	83.76
KRH14794	Soybean	nucleus	81.45	82.22
KRH73345	Soybean	nucleus	81.45	82.22
KRH73352	Soybean	cytosol	77.36	80.13
KRH41775	Soybean	cytosol	77.99	80.0
KRH14791	Soybean	cytosol	75.79	78.5
KRH14788	Soybean	cytosol	75.16	77.85
KRH14787	Soybean	cytosol	74.53	77.2
KRH73355	Soybean	cytosol	21.07	72.04
VIT_11s0016g02380.t01	Wine grape	cytosol	50.31	52.29
VIT_18s0001g01840.t01	Wine grape	cytosol	46.86	51.03
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.82	37.69
Zm00001d044978_P001	Maize	extracellular	5.66	14.63

Protein Annotations

EntrezGene:100256784	wikigene:100256784	MapMan:11.5.1.2	Gene3D:2.60.120.330	EntrezGene:ACO2	wikigene:ACO2
ProteinID:AFU66005	ProteinID:AFU66005.1	EMBL:AM477276	ProteinID:CAN68493	ProteinID:CAN68493.1	ProteinID:CCB51996
ProteinID:CCB51996.1	ncoils:Coil	InterPro:DIOX_N	UniProt:F6HIF0	EMBL:FN595765	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009693
GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EMBL:JX446622	RefSeq:NP_001267871.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF381	SUPFAM:SSF51197	TIGR:TC60326	TIGR:TC64623
UniParc:UPI00015CAEE7	ArrayExpress:VIT_12s0059g01380	EnsemblPlantsGene:VIT_12s0059g01380	EnsemblPlants:VIT_12s0059g01380.t01	unigene:Vvi.4992	SEG:seg

Description

1-aminocyclopropane-1-carboxylic acid oxidase 2 [Source:UniProtKB/TrEMBL;Acc:F6HIF0]

Coordinates

chr12:+:6310873..6312488

Molecular Weight (calculated)

35917.3 Da

IEP (calculated)

5.162

GRAVY (calculated)

-0.342

Length

318 amino acids

Sequence
(BLAST)

001: MEAFPVINME MLNGEERGAT MEMIKDACEN WGFFELVNHG ISHEQMDAVE KLTKGHYRKC MEQRFKELVA AKALEGVQTE IKDMDWESTF FLRHLPVSNV
101: SDFPDLDEEY RKVMKDFALK LEKLAEELLD LLCENLGLEK GYLKKAFHGS KGPNFGTKVS NYPPCPKPDL IKGLRAHTDA GGIILLFQDD TVSGLQLLKD
201: GQWVDVPPMR HSIVVNLGDQ LEVITNGKYK SVLHRVVAQT DGNRMSIASF YNPGNDAVIY PAPALLEKEA EKDQVYPKFV FDDYMKLYAG LKFQAKEPRF
301: EAMKNVEASV NMGPIATA

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.