CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14791	Soybean	cytosol	97.72	97.72
KRH14787	Soybean	cytosol	97.39	97.39
KRH73354	Soybean	cytosol	59.93	93.4
KRH73352	Soybean	cytosol	91.53	91.53
KRH73355	Soybean	cytosol	27.04	89.25
KRH41775	Soybean	cytosol	86.97	86.13
KRH73345	Soybean	nucleus	81.11	79.05
KRH14794	Soybean	nucleus	80.78	78.73
VIT_12s0059g01380.t01	Wine grape	cytosol	77.85	75.16
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	75.57	72.96
KRH02009	Soybean	cytosol	75.57	72.73
KRH36520	Soybean	cytosol	74.59	72.01
KRH11502	Soybean	cytosol	74.27	71.7
KRH53298	Soybean	nucleus	52.44	52.44
KRH64615	Soybean	cytosol	52.12	51.95
KRH60136	Soybean	endoplasmic reticulum	50.16	50.16
KRH41426	Soybean	cytosol	50.16	50.16
KRH49052	Soybean	cytosol	49.19	49.35
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.22	39.23
Zm00001d044978_P001	Maize	extracellular	5.54	13.82

Protein Annotations

EntrezGene:100820256	MapMan:11.5.1.2	Gene3D:2.60.120.330	EMBL:ACUP02008523	ncoils:Coil	InterPro:DIOX_N
EnsemblPlantsGene:GLYMA_14G0490002	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009693	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:K7M4Z7	EnsemblPlants:KRH14788	ProteinID:KRH14788
ProteinID:KRH14788.1	ProteinID:KRH14789.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF193	SUPFAM:SSF51197	UniParc:UPI000233ACF1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:+:3800978..3803003

Molecular Weight (calculated)

34972.9 Da

IEP (calculated)

5.164

GRAVY (calculated)

-0.405

Length

307 amino acids

Sequence
(BLAST)

001: MENFPVINLE NLNGEERKAT LNQIEDACQN WGFFELVSHG IPLELLDTVE RLTKEHYRKC MEKRFKEAVS SKGLEAEVKD MDWESTFFLR HLPTSNISEI
101: PDLSQEYRDA MKEFAQKLEK LAEELLDLLC ENLGLEKGYL KNAFYGSRGP NFGTKVANYP ACPKPELVKG LRAHTDAGGI ILLLQDDKVS GLQLLKNGQW
201: VDVPPMRHSI VVNLGDQIEV ITNGRYKSVE HRVIAQTNGT RMSVASFYNP ASDALIYPAP VLLEQKAEDT EQVYPKFVFE DYMKLYATLK FQPKEPRFEA
301: MKAIGSF

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.