CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53298	Soybean	nucleus	95.13	95.44
VIT_18s0001g01840.t01	Wine grape	cytosol	77.6	81.85
CDY72562	Canola	cytosol	55.52	73.08
CDX88360	Canola	cytosol	22.4	72.63
PGSC0003DMT400030740	Potato	cytosol	73.7	72.52
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	72.08	72.31
Solyc06g060070.2.1	Tomato	cytosol	73.7	72.29
CDY38352	Canola	cytosol	72.08	72.08
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	71.75	71.99
Bra008302.1-P	Field mustard	cytosol	66.23	71.83
CDX88361	Canola	cytosol	18.83	71.6
GSMUA_Achr6P12910_001	Banana	cytosol	71.1	71.1
Bra003687.1-P	Field mustard	cytosol	70.13	70.82
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	64.94	70.42
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	71.75	69.28
GSMUA_AchrUn_...	Banana	cytosol	60.71	68.75
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	70.45	68.67
GSMUA_AchrUn_...	Banana	cytosol	60.06	67.77
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	66.88	66.67
HORVU1Hr1G020450.1	Barley	cytosol	66.56	66.56
TraesCS1B01G117400.1	Wheat	cytosol	66.23	66.23
TraesCS1D01G098000.1	Wheat	cytosol	66.23	66.23
TraesCS1A01G089500.1	Wheat	cytosol	65.91	65.91
TraesCS1A01G089600.1	Wheat	cytosol	65.58	65.58
TraesCS1B01G117500.1	Wheat	cytosol	65.58	65.58
HORVU1Hr1G020410.2	Barley	cytosol	65.91	65.48
TraesCS1D01G098100.1	Wheat	cytosol	65.26	65.26
GSMUA_AchrUn_...	Banana	cytosol	32.79	65.16
Zm00001d024852_P001	Maize	cytosol	66.56	65.08
Zm00001d024851_P001	Maize	cytosol	66.23	64.76
Zm00001d024850_P001	Maize	cytosol	66.23	64.76
Zm00001d024843_P001	Maize	cytosol	65.58	64.33
GSMUA_Achr10P...	Banana	cytosol	69.16	63.96
EES17716	Sorghum	cytosol	65.58	63.92
Os05t0149400-01	Rice	plasma membrane	63.64	63.64
EES19027	Sorghum	cytosol	64.94	63.29
GSMUA_AchrUn_...	Banana	cytosol	31.82	63.23
TraesCS4A01G221300.1	Wheat	cytosol	63.96	62.94
Zm00001d004718_P001	Maize	cytosol	63.31	62.9
Zm00001d004719_P001	Maize	cytosol	63.31	62.9
Os11t0186900-01	Rice	cytosol	62.99	62.78
KRH73354	Soybean	cytosol	39.94	62.44
TraesCS4D01G095500.1	Wheat	cytosol	63.96	62.34
TraesCSU01G067700.1	Wheat	cytosol	63.96	62.34
EES09442	Sorghum	cytosol	63.96	62.15
HORVU4Hr1G017660.1	Barley	cytosol	63.64	62.03
Zm00001d000163_P001	Maize	extracellular	62.99	61.98
EES08130	Sorghum	cytosol	62.99	61.39
Os05t0149300-00	Rice	cytosol, peroxisome	34.74	57.53
Zm00001d024853_P001	Maize	plastid	65.91	57.02
KRH73352	Soybean	cytosol	53.57	53.75
HORVU1Hr1G020430.1	Barley	peroxisome	53.25	52.9
KRH14788	Soybean	cytosol	51.95	52.12
KRH14791	Soybean	cytosol	51.95	52.12
KRH73345	Soybean	nucleus	53.25	52.06
KRH14794	Soybean	nucleus	53.25	52.06
KRH36520	Soybean	cytosol	53.57	51.89
KRH51147	Soybean	cytoskeleton, cytosol, peroxisome	53.25	51.57
KRH11502	Soybean	cytosol	53.25	51.57
KRH14787	Soybean	cytosol	51.3	51.47
KRH02009	Soybean	cytosol	52.92	51.1
KRH41775	Soybean	cytosol	51.3	50.97
KRH41426	Soybean	cytosol	47.4	47.56
KRH60136	Soybean	endoplasmic reticulum	47.08	47.23
KRH49052	Soybean	cytosol	46.75	47.06
KRH73355	Soybean	cytosol	12.01	39.78
GSMUA_AchrUn_...	Banana	cytosol	61.04	32.7

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EMBL:ACUP02002770	ncoils:Coil	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_04G245900
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009693	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	UniProt:I1JZ19
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH64615	ProteinID:KRH64615	ProteinID:KRH64615.1
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF189
SUPFAM:SSF51197	UniParc:UPI000233A21E	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:51349549..51351453

Molecular Weight (calculated)

34825.7 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.490

Length

308 amino acids

Sequence
(BLAST)

001: MAVPVIDFSK LNGEERAKTM AQIANGCEEW GFFQLINHGI PEELLERVKK VAAEFYKLER EENFKNSKSV KLLSDLVEKK SSEKLEHADW EDVITLLDDN
101: EWPEKTPGFR ETMAKYRAEL KKLAEKVMEV MDENLGLTKG YIKKALNGGD GDNAFFGTKV SHYPPCPHPG LVKGLRAHTD AGGVILLLQD DKVGGLQMLK
201: DGQWIDVQPL PNAIVINTGD QIEVLSNGRY KSCWHRVLAT PDGNRRSIAS FYNPSFKATI CPAPQLVEKE DQQVNQTYPK FVFGDYMSVY AEQKFLPKEP
301: RFQAVRAM

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.