Factsheet for GSMUA_Achr6P12910_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	46.1	91.61
GSMUA_AchrUn_...	Banana	cytosol	45.45	90.32
GSMUA_AchrUn_...	Banana	cytosol	79.87	90.11
GSMUA_AchrUn_...	Banana	cytosol	76.3	86.4
GSMUA_Achr10P...	Banana	cytosol	77.92	72.07
VIT_18s0001g01840.t01	Wine grape	cytosol	68.18	71.92
CDX88361	Canola	cytosol	18.83	71.6
KRH64615	Soybean	cytosol	71.1	71.1
KRH53298	Soybean	nucleus	70.78	71.01
CDX88360	Canola	cytosol	21.43	69.47
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	68.83	69.06
CDY38352	Canola	cytosol	68.83	68.83
PGSC0003DMT400030740	Potato	cytosol	69.81	68.69
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	68.18	68.4
CDY72562	Canola	cytosol	51.95	68.38
Solyc06g060070.2.1	Tomato	cytosol	69.48	68.15
Bra008302.1-P	Field mustard	cytosol	62.66	67.96
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	62.34	67.61
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	69.48	67.08
Bra003687.1-P	Field mustard	cytosol	66.23	66.89
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	68.18	66.46
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	63.31	63.11
GSMUA_AchrUn_...	Banana	cytosol	17.86	50.93
GSMUA_Achr7P18420_001	Banana	cytosol	51.3	49.69
GSMUA_Achr1P18250_001	Banana	cytosol	50.65	49.52
GSMUA_Achr6P00870_001	Banana	cytosol	44.16	46.42
GSMUA_AchrUn_...	Banana	cytosol	79.87	42.78
GSMUA_Achr5P09690_001	Banana	cytosol	42.21	37.9

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	ncoils:Coil	InterPro:DIOX_N	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009693	GO:GO:0009815	GO:GO:0009835	GO:GO:0009987	GO:GO:0016491	GO:GO:0030246
GO:GO:0031418	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G12910_001	EnsemblPlants:GSMUA_Achr6P12910_001	EnsemblPlants:GSMUA_Achr6T12910_001
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0T6I9	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF189	SUPFAM:SSF51197	UniParc:UPI000295E26E
SEG:seg	:	:	:	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:GMGC_GENE;Acc:GSMUA_Achr6G12910_001]

Coordinates

chr6:-:8622468..8623805

Molecular Weight (calculated)

34757.0 Da

IEP (calculated)

4.656

GRAVY (calculated)

-0.459

Length

308 amino acids

Sequence
(BLAST)

001: MAVPIIDFSK LEGEERAETL AQIATGCEEW GFFQLVNHGI PVELLERVKK VCSECYRLRA EGFKGSKPVQ LLNKLVEEEE DEAADAKRLD DVDWEDVFLL
101: QDDNEWPSNP PEFRETMKEY REELRKLAEK VMEVMDENLG FEKGSIKSAF SGNGEHHPFF GTKVSHYPPC PRLDLVNGLR AHTDAGGVIL LFQDDQVGGL
201: QILKDGQWID VQPVANAIVI NTGDQVEVLS NGRYKSVWHR VLTTSDGNRR SIASFYNPSL KATIAPGTNE DDSAAALYPK YVFGDYMDVY VKHKFSPKEP
301: RFEAVKAL

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.