Factsheet for GSMUA_AchrUn_randomP20440_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	96.77	96.77
GSMUA_AchrUn_...	Banana	cytosol	97.42	55.31
GSMUA_AchrUn_...	Banana	cytosol	85.81	48.9
GSMUA_Achr6P12910_001	Banana	cytosol	90.32	45.45
CDY72562	Canola	cytosol	60.65	40.17
Bra008302.1-P	Field mustard	cytosol	60.65	33.1
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	58.71	32.04
GSMUA_Achr10P...	Banana	cytosol	68.39	31.83
KRH64615	Soybean	cytosol	63.23	31.82
KRH53298	Soybean	nucleus	62.58	31.6
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	61.94	31.27
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	61.29	30.94
CDX88361	Canola	cytosol	16.13	30.86
CDY38352	Canola	cytosol	61.29	30.84
VIT_18s0001g01840.t01	Wine grape	cytosol	58.06	30.82
PGSC0003DMT400030740	Potato	cytosol	61.94	30.67
Solyc06g060070.2.1	Tomato	cytosol	61.94	30.57
Bra003687.1-P	Field mustard	cytosol	60.0	30.49
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	61.94	30.09
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	58.71	28.8
GSMUA_AchrUn_...	Banana	cytosol	98.06	26.43
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	50.32	25.24
GSMUA_Achr6P00870_001	Banana	cytosol	34.84	18.43
GSMUA_Achr7P18420_001	Banana	cytosol	35.48	17.3
GSMUA_Achr1P18250_001	Banana	cytosol	33.55	16.51
GSMUA_Achr5P09690_001	Banana	cytosol	31.61	14.29
GSMUA_AchrUn_...	Banana	cytosol	0.0	0.0
CDX88360	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP20440_001	EnsemblPlants:GSMUA_AchrUn_randomT20440_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG20440_001	Gene3D:2.60.120.330	InterPro:DIOX_N	InterPro:IPNS-like
InterPro:IPR027443	ncoils:Coil	PANTHER:PTHR10209	PANTHER:PTHR10209:SF394	PFAM:PF14226	SUPFAM:SSF51197
UniParc:UPI000294C97C	UniProt:M0UAV3	MapMan:50.1.13	:	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG20440_001]

Coordinates

chrchrUn_random:+:99034132..99034822

Molecular Weight (calculated)

17815.0 Da

IEP (calculated)

4.525

GRAVY (calculated)

-0.623

Length

155 amino acids

Sequence
(BLAST)

001: MAIPVIDFSK LEGKERAETL ARIANGCQEW GFFQLVNHGI PVDLLEHVKK VCSECYRLRA EGFKASKPVQ LLNKLVEEEG DAADAKRLDN VDWEDVFLLQ
101: DDNEWPANPP EFRETMKEYR EELRKLAEKV MEVMDENLGF EKGSIRNSFS GNGEH

Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)

001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL

Arabidopsis Description

1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.