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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, peroxisome
Any Predictor:cytoskeleton, cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
EpiLoc:peroxisome
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88360 Canola cytosol 27.83 90.53
Bra008302.1-P Field mustard cytosol 82.2 89.44
AT1G77330.1 Thale cress cytoskeleton, cytosol, peroxisome 88.03 88.6
Bra003687.1-P Field mustard cytosol 83.5 84.59
CDX88361 Canola cytosol 20.39 77.78
KRH53298 Soybean nucleus 67.64 68.08
KRH64615 Soybean cytosol 66.67 66.88
VIT_18s0001g01840.t01 Wine grape cytosol 63.11 66.78
PGSC0003DMT400015435 Potato cytoskeleton, cytosol, peroxisome 67.64 65.52
PGSC0003DMT400030740 Potato cytosol 65.7 64.86
Solyc06g060070.2.1 Tomato cytosol 64.72 63.69
GSMUA_Achr6P12910_001 Banana cytosol 63.11 63.31
Zm00001d024852_P001 Maize cytosol 61.16 60.0
GSMUA_AchrUn_... Banana cytosol 52.75 59.93
Zm00001d024851_P001 Maize cytosol 60.84 59.68
Zm00001d024850_P001 Maize cytosol 60.84 59.68
TraesCS1D01G098000.1 Wheat cytosol 58.9 59.09
TraesCS1B01G117400.1 Wheat cytosol 58.9 59.09
TraesCS1A01G089500.1 Wheat cytosol 58.9 59.09
TraesCS1D01G098100.1 Wheat cytosol 58.58 58.77
TraesCS1B01G117500.1 Wheat cytosol 58.58 58.77
TraesCS1A01G089600.1 Wheat cytosol 58.58 58.77
HORVU1Hr1G020450.1 Barley cytosol 58.58 58.77
GSMUA_AchrUn_... Banana cytosol 51.78 58.61
HORVU1Hr1G020410.2 Barley cytosol 58.58 58.39
Zm00001d024843_P001 Maize cytosol 59.22 58.28
Os11t0186900-01 Rice cytosol 58.25 58.25
EES17716 Sorghum cytosol 59.22 57.91
EES19027 Sorghum cytosol 58.58 57.28
TraesCS4A01G221300.1 Wheat cytosol 57.93 57.19
Zm00001d004718_P001 Maize cytosol 57.28 57.1
Zm00001d004719_P001 Maize cytosol 57.28 57.1
TraesCSU01G067700.1 Wheat cytosol 58.25 56.96
EES09442 Sorghum cytosol 58.25 56.78
GSMUA_Achr10P... Banana cytosol 61.16 56.76
TraesCS4D01G095500.1 Wheat cytosol 57.93 56.65
HORVU4Hr1G017660.1 Barley cytosol 57.93 56.65
EES08130 Sorghum cytosol 57.93 56.65
Os05t0149400-01 Rice plasma membrane 56.31 56.49
Zm00001d000163_P001 Maize extracellular 56.63 55.91
Zm00001d024853_P001 Maize plastid 59.87 51.97
GSMUA_AchrUn_... Banana cytosol 25.89 51.61
GSMUA_AchrUn_... Banana cytosol 25.24 50.32
Os05t0149300-00 Rice cytosol, peroxisome 30.1 50.0
Bra027049.1-P Field mustard cytosol 48.87 47.19
Bra031798.1-P Field mustard cytosol 48.87 47.04
Bra019734.1-P Field mustard cytosol 48.54 46.88
Bra034504.1-P Field mustard cytosol 48.54 46.88
Bra015380.1-P Field mustard cytosol 47.9 46.11
HORVU1Hr1G020430.1 Barley peroxisome 45.63 45.48
Bra031090.1-P Field mustard cytosol 42.72 43.71
GSMUA_AchrUn_... Banana cytosol 52.75 28.35
Protein Annotations
MapMan:11.5.1.2Gene3D:2.60.120.330EnsemblPlantsGene:Bra015675EnsemblPlants:Bra015675.1EnsemblPlants:Bra015675.1-PInterPro:DIOX_N
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443UniProt:M4DGQ0
InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF189
SUPFAM:SSF51197UniParc:UPI0002541AF5::::
Description
AT1G77330 (E=5e-155) | 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative
Coordinates
chrA07:-:21416663..21417868
Molecular Weight (calculated)
34747.7 Da
IEP (calculated)
4.664
GRAVY (calculated)
-0.604
Length
309 amino acids
Sequence
(BLAST)
001: MAIPVIDFSK INGEEREKTL SDIAKACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSTPV KLLNELLEQN SGEKIESVDW EDVFTLLDHN
101: QNEWPSNTSG LKGDVGVQRR SEEASEQDDG SDGRNLGLPK GYIKKAFNEG MEEDGEETAF FGTKVSHYPP CPHPELVNGL RAHTDAGGVV LLFQDDEYDG
201: LQVLKDGEWI DVQPVHNAIV INIGDQIEVL SNGRYKSAWH RVLAREEGNR RSIASFYNPS YKAAIGPAAV SEEGSEKKYP KFVFGDYMDV YANQKFMPKE
301: PRFLAVKPL
Best Arabidopsis Sequence Match ( AT1G77330.1 )
(BLAST)
001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
Arabidopsis Description
1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.