Factsheet for TraesCS4A01G221300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G067700.1	Wheat	cytosol	98.08	97.15
HORVU4Hr1G017660.1	Barley	cytosol	98.08	97.15
TraesCS4D01G095500.1	Wheat	cytosol	96.49	95.57
Os11t0186900-01	Rice	cytosol	83.07	84.14
Zm00001d004719_P001	Maize	cytosol	78.91	79.68
Zm00001d004718_P001	Maize	cytosol	78.91	79.68
Zm00001d000163_P001	Maize	extracellular	78.59	78.59
EES09442	Sorghum	cytosol	79.55	78.55
EES08130	Sorghum	cytosol	78.59	77.85
CDX88360	Canola	cytosol	19.49	64.21
VIT_18s0001g01840.t01	Wine grape	cytosol	59.74	64.04
KRH64615	Soybean	cytosol	62.94	63.96
TraesCS1A01G089500.1	Wheat	cytosol	62.62	63.64
KRH53298	Soybean	nucleus	62.3	63.52
TraesCS1A01G089600.1	Wheat	cytosol	62.3	63.31
GSMUA_Achr10P...	Banana	cytosol	67.09	63.06
AT1G77330.1	Thale cress	cytoskeleton, cytosol, peroxisome	61.66	62.87
PGSC0003DMT400030740	Potato	cytosol	62.62	62.62
CDY38352	Canola	cytosol	61.34	62.34
CDX88361	Canola	cytosol	15.97	61.73
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	55.91	61.62
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	60.38	61.56
Bra008302.1-P	Field mustard	cytosol	55.59	61.27
Solyc06g060070.2.1	Tomato	cytosol	61.34	61.15
CDY72562	Canola	cytosol	45.69	61.11
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	61.34	60.76
PGSC0003DMT400015435	Potato	cytoskeleton, cytosol, peroxisome	61.66	60.5
Bra003687.1-P	Field mustard	cytosol	56.55	58.03
Bra015675.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	57.19	57.93
TraesCS5A01G234200.1	Wheat	cytosol	48.56	47.65
TraesCS6A01G325500.1	Wheat	cytosol	43.45	46.74
TraesCS5A01G234300.1	Wheat	cytosol	47.28	46.4
TraesCS6A01G325600.1	Wheat	cytosol	47.92	45.59
TraesCS6A01G325400.1	Wheat	cytosol	47.28	44.98
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	41.85	44.71
TraesCS6A01G325700.1	Wheat	cytosol	46.96	44.41

Protein Annotations

EnsemblPlants:TraesCS4A01G221300.1	EnsemblPlantsGene:TraesCS4A01G221300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	ncoils:Coil	PANTHER:PTHR10209	PANTHER:PTHR10209:SF189	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.5.1.2	:

Description

No Description!

Coordinates

chr4A:+:527001528..527002834

Molecular Weight (calculated)

34863.4 Da

IEP (calculated)

4.572

GRAVY (calculated)

-0.346

Length

313 amino acids

Sequence
(BLAST)

001: MAIPVIDFSR LDGDERAAAL AEIAAGFEEW GFFQLVNTGI PDELLERVKK VCTDCYKLRE DGFNRSNPAV KALAALVEQE GEGLAPRKVE GMDWEDVFTL
101: HDDLPWPSIP PTFKETMMEY RTELKKLAEK MLGVMEELLG LEEGQITKVF SKDGDFEPFY GTKVSHYPPC PRPEMVDGLR AHTDAGGLIL LFQDDRVGGL
201: QVLGRDGRWA DVQPVENAIV INTGDQIEVM SNGRYKSAWH RVLATRDGNR RSIASFYNPA RAATIAPAIP AAADSGDYPS FSFGDYMEVY IKQKFQDKEP
301: RFAAAAATKN MVD

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.