Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 89.56 | 99.65 |
| CDX88361 | Canola | cytosol | 25.32 | 98.77 |
| CDY38352 | Canola | cytosol | 93.04 | 95.45 |
| CDY40884 | Canola | cytoskeleton, cytosol, peroxisome | 92.09 | 94.79 |
| Bra008302.1-P | Field mustard | cytosol | 85.13 | 94.72 |
| AT1G77330.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 91.14 | 93.81 |
| CDX88360 | Canola | cytosol | 27.53 | 91.58 |
| CDY72562 | Canola | cytosol | 66.14 | 89.32 |
| KRH53298 | Soybean | nucleus | 69.94 | 71.99 |
| VIT_18s0001g01840.t01 | Wine grape | cytosol | 65.51 | 70.89 |
| KRH64615 | Soybean | cytosol | 68.67 | 70.45 |
| PGSC0003DMT400015435 | Potato | cytoskeleton, cytosol, peroxisome | 68.99 | 68.34 |
| GSMUA_Achr6P12910_001 | Banana | cytosol | 66.46 | 68.18 |
| PGSC0003DMT400030740 | Potato | cytosol | 67.09 | 67.73 |
| Solyc06g060070.2.1 | Tomato | cytosol | 66.46 | 66.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.33 | 65.44 |
| Zm00001d024852_P001 | Maize | cytosol | 63.92 | 64.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.38 | 64.1 |
| Zm00001d024851_P001 | Maize | cytosol | 62.97 | 63.17 |
| Zm00001d024850_P001 | Maize | cytosol | 62.97 | 63.17 |
| TraesCS1B01G117400.1 | Wheat | cytosol | 61.39 | 62.99 |
| TraesCS1A01G089500.1 | Wheat | cytosol | 61.39 | 62.99 |
| TraesCS1D01G098000.1 | Wheat | cytosol | 61.39 | 62.99 |
| TraesCS1A01G089600.1 | Wheat | cytosol | 61.08 | 62.66 |
| TraesCS1B01G117500.1 | Wheat | cytosol | 61.08 | 62.66 |
| TraesCS1D01G098100.1 | Wheat | cytosol | 61.08 | 62.66 |
| HORVU1Hr1G020450.1 | Barley | cytosol | 61.08 | 62.66 |
| Zm00001d024843_P001 | Maize | cytosol | 62.03 | 62.42 |
| Os11t0186900-01 | Rice | cytosol | 60.76 | 62.14 |
| EES17716 | Sorghum | cytosol | 62.03 | 62.03 |
| HORVU1Hr1G020410.2 | Barley | cytosol | 60.76 | 61.94 |
| Zm00001d004719_P001 | Maize | cytosol | 60.44 | 61.61 |
| Zm00001d004718_P001 | Maize | cytosol | 60.44 | 61.61 |
| EES19027 | Sorghum | cytosol | 61.39 | 61.39 |
| TraesCS4A01G221300.1 | Wheat | cytosol | 60.76 | 61.34 |
| EES09442 | Sorghum | cytosol | 61.08 | 60.88 |
| HORVU4Hr1G017660.1 | Barley | cytosol | 60.76 | 60.76 |
| EES08130 | Sorghum | cytosol | 60.76 | 60.76 |
| TraesCSU01G067700.1 | Wheat | cytosol | 60.76 | 60.76 |
| GSMUA_Achr10P... | Banana | cytosol | 63.92 | 60.66 |
| TraesCS4D01G095500.1 | Wheat | cytosol | 60.44 | 60.44 |
| Os05t0149400-01 | Rice | plasma membrane | 58.86 | 60.39 |
| Zm00001d000163_P001 | Maize | extracellular | 59.49 | 60.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.43 | 60.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.8 | 58.71 |
| Os05t0149300-00 | Rice | cytosol, peroxisome | 33.23 | 56.45 |
| Zm00001d024853_P001 | Maize | plastid | 62.66 | 55.62 |
| HORVU1Hr1G020430.1 | Barley | peroxisome | 48.1 | 49.03 |
| CDY12944 | Canola | cytosol | 48.73 | 48.12 |
| CDY19546 | Canola | cytosol | 48.73 | 48.12 |
| CDY08654 | Canola | cytosol | 48.42 | 47.81 |
| CDY32039 | Canola | cytosol | 48.42 | 47.81 |
| CDY66260 | Canola | cytosol | 48.42 | 47.66 |
| CDY34603 | Canola | cytosol | 48.1 | 47.35 |
| CDY18281 | Canola | cytosol | 47.78 | 47.04 |
| CDY53397 | Canola | cytosol | 47.47 | 46.73 |
| CDY58326 | Canola | cytoskeleton, cytosol, peroxisome | 44.62 | 45.48 |
| CDY70340 | Canola | cytosol | 43.35 | 45.36 |
| CDY21655 | Canola | cytosol | 44.3 | 45.16 |
| CDX81937 | Canola | cytosol | 43.99 | 44.84 |
| CDX68962 | Canola | cytosol | 10.76 | 33.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.33 | 30.96 |
Protein Annotations
| MapMan:11.5.1.2 | Gene3D:2.60.120.330 | GO:A0A078DGL9 | EnsemblPlants:CDX87524 | ProteinID:CDX87524 | ProteinID:CDX87524.1 |
| InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00146516001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF189 | SUPFAM:SSF51197 |
| UniParc:UPI0004EE8855 | : | : | : | : | : |
Description
BnaA07g33490D
Coordinates
chrLK031850:+:1037172..1038472
Molecular Weight (calculated)
35915.5 Da
IEP (calculated)
4.850
GRAVY (calculated)
-0.543
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIPVIDFSK INGEEREKTL SDIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSTPV KLLNELLEQN SGEKIESVDW EDVFTLLDHN
101: QNEWPSNTSG LKEAMLEYRG EVRKLASKMM EVMDENLGLP KGYIKKAFNE GMEDGEEETA FFGTKVSHYP PCPRPELVNG LRAHTDAGGV VLLFQDDEYD
201: GLQVLKDGEW IDVQPVHNAI VINTGDQIEV LSNGRHITLD RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVSEE GSEKKYPKFV FGDYMDVYAN
301: QKFMPKEPRF LAVKPL
101: QNEWPSNTSG LKEAMLEYRG EVRKLASKMM EVMDENLGLP KGYIKKAFNE GMEDGEEETA FFGTKVSHYP PCPRPELVNG LRAHTDAGGV VLLFQDDEYD
201: GLQVLKDGEW IDVQPVHNAI VINTGDQIEV LSNGRHITLD RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVSEE GSEKKYPKFV FGDYMDVYAN
301: QKFMPKEPRF LAVKPL
001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
Arabidopsis Description
1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.