Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72562 | Canola | cytosol | 93.83 | 32.48 |
| Os05t0149300-00 | Rice | cytosol, peroxisome | 62.96 | 27.42 |
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 93.83 | 26.76 |
| CDX87524 | Canola | cytoskeleton, cytosol, peroxisome | 98.77 | 25.32 |
| CDY38352 | Canola | cytosol | 95.06 | 25.0 |
| AT1G77330.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 93.83 | 24.76 |
| CDY40884 | Canola | cytoskeleton, cytosol, peroxisome | 92.59 | 24.43 |
| VIT_18s0001g01840.t01 | Wine grape | cytosol | 77.78 | 21.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.37 | 20.96 |
| Bra015675.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 77.78 | 20.39 |
| KRH53298 | Soybean | nucleus | 76.54 | 20.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.9 | 20.15 |
| Solyc06g060070.2.1 | Tomato | cytosol | 74.07 | 19.11 |
| PGSC0003DMT400030740 | Potato | cytosol | 72.84 | 18.85 |
| KRH64615 | Soybean | cytosol | 71.6 | 18.83 |
| GSMUA_Achr6P12910_001 | Banana | cytosol | 71.6 | 18.83 |
| PGSC0003DMT400015435 | Potato | cytoskeleton, cytosol, peroxisome | 74.07 | 18.81 |
| Zm00001d024852_P001 | Maize | cytosol | 69.14 | 17.78 |
| Zm00001d024843_P001 | Maize | cytosol | 67.9 | 17.52 |
| Zm00001d024851_P001 | Maize | cytosol | 67.9 | 17.46 |
| Zm00001d024850_P001 | Maize | cytosol | 67.9 | 17.46 |
| TraesCS1A01G089600.1 | Wheat | cytosol | 65.43 | 17.21 |
| TraesCS1D01G098100.1 | Wheat | cytosol | 65.43 | 17.21 |
| TraesCS1A01G089500.1 | Wheat | cytosol | 65.43 | 17.21 |
| TraesCS1B01G117400.1 | Wheat | cytosol | 65.43 | 17.21 |
| TraesCS1D01G098000.1 | Wheat | cytosol | 65.43 | 17.21 |
| HORVU1Hr1G020450.1 | Barley | cytosol | 65.43 | 17.21 |
| TraesCS1B01G117500.1 | Wheat | cytosol | 65.43 | 17.21 |
| HORVU1Hr1G020410.2 | Barley | cytosol | 65.43 | 17.1 |
| Zm00001d004719_P001 | Maize | cytosol | 65.43 | 17.1 |
| HORVU1Hr1G020430.1 | Barley | peroxisome | 65.43 | 17.1 |
| Zm00001d004718_P001 | Maize | cytosol | 65.43 | 17.1 |
| EES19027 | Sorghum | cytosol | 66.67 | 17.09 |
| EES17716 | Sorghum | cytosol | 66.67 | 17.09 |
| Os05t0149400-01 | Rice | plasma membrane | 62.96 | 16.56 |
| GSMUA_Achr10P... | Banana | cytosol | 67.9 | 16.52 |
| Os11t0186900-01 | Rice | cytosol | 62.96 | 16.5 |
| EES09442 | Sorghum | cytosol | 64.2 | 16.4 |
| Zm00001d000163_P001 | Maize | extracellular | 62.96 | 16.29 |
| EES08130 | Sorghum | cytosol | 62.96 | 16.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.86 | 16.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.86 | 16.13 |
| TraesCS4A01G221300.1 | Wheat | cytosol | 61.73 | 15.97 |
| HORVU4Hr1G017660.1 | Barley | cytosol | 61.73 | 15.82 |
| TraesCS4D01G095500.1 | Wheat | cytosol | 60.49 | 15.51 |
| Zm00001d024853_P001 | Maize | plastid | 67.9 | 15.45 |
| TraesCSU01G067700.1 | Wheat | cytosol | 59.26 | 15.19 |
| CDX81937 | Canola | cytosol | 51.85 | 13.55 |
| CDY70340 | Canola | cytosol | 49.38 | 13.24 |
| CDY58326 | Canola | cytoskeleton, cytosol, peroxisome | 50.62 | 13.23 |
| CDY21655 | Canola | cytosol | 50.62 | 13.23 |
| CDY18281 | Canola | cytosol | 51.85 | 13.08 |
| CDY08654 | Canola | cytosol | 50.62 | 12.81 |
| CDY32039 | Canola | cytosol | 50.62 | 12.81 |
| CDY66260 | Canola | cytosol | 50.62 | 12.77 |
| CDY53397 | Canola | cytosol | 50.62 | 12.77 |
| CDY34603 | Canola | cytosol | 50.62 | 12.77 |
| CDX68962 | Canola | cytosol | 16.05 | 12.75 |
| CDY12944 | Canola | cytosol | 49.38 | 12.5 |
| CDY19546 | Canola | cytosol | 49.38 | 12.5 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.14 | 9.74 |
| CDX88360 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX88361 | EnsemblPlantsGene:GSBRNA2T00147883001 | Gene3D:2.60.120.330 | InterPro:IPNS-like | InterPro:IPR027443 | PANTHER:PTHR10209 |
| PANTHER:PTHR10209:SF189 | ProteinID:CDX88361 | ProteinID:CDX88361.1 | SEG:seg | SUPFAM:SSF51197 | UniParc:UPI0004EE107B |
| MapMan:50.1.13 | : | : | : | : | : |
Description
BnaC06g38050D
Coordinates
chrLK031855:-:563497..563742
Molecular Weight (calculated)
9077.0 Da
IEP (calculated)
4.843
GRAVY (calculated)
-0.422
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MLEYRGEVRK LASKMMEVMD ENLGLPKGYI KKAFNEGMEE DGEEETAFFG TKVSHYPPCP RPELVNGLRA HTDAGGVVLL F
001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
Arabidopsis Description
1-aminocyclopropane-1-carboxylate oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPW4]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.