CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53397	Canola	cytosol	99.38	99.38
AT1G05010.1	Thale cress	cytosol	94.39	93.81
CDY32039	Canola	cytosol	69.78	70.0
CDY12944	Canola	cytosol	68.85	69.06
CDY19546	Canola	cytosol	68.85	69.06
CDY08654	Canola	cytosol	68.85	69.06
CDY66260	Canola	cytosol	68.54	68.54
CDY34603	Canola	cytosol	68.22	68.22
CDX88360	Canola	cytosol	15.58	52.63
CDX88361	Canola	cytosol	13.08	51.85
CDY38352	Canola	cytosol	46.42	48.38
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	46.42	48.06
CDY70340	Canola	cytosol	45.17	48.01
CDY40884	Canola	cytoskeleton, cytosol, peroxisome	45.79	47.88
CDX87524	Canola	cytoskeleton, cytosol, peroxisome	47.04	47.78
CDX81937	Canola	cytosol	46.11	47.74
CDY72562	Canola	cytosol	34.58	47.44
CDX88362	Canola	cytoskeleton, cytosol, peroxisome	41.74	47.18
CDY21655	Canola	cytosol	45.48	47.1
Zm00001d046848_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.22	37.31
CDX68962	Canola	cytosol	11.53	36.27
Zm00001d044978_P001	Maize	extracellular	5.3	13.82

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	GO:A0A078FZ06	UniProt:A0A078FZ06	EnsemblPlants:CDY18281	ProteinID:CDY18281
ProteinID:CDY18281.1	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00002816001
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF193	SUPFAM:SSF51197	UniParc:UPI0004EDAE8A	SEG:seg

Description

BnaC05g03040DBnaC05g03040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZ06]

Coordinates

chrLK032083:-:663466..665002

Molecular Weight (calculated)

36393.5 Da

IEP (calculated)

5.333

GRAVY (calculated)

-0.492

Length

321 amino acids

Sequence
(BLAST)

001: MESFPIINLE KLNGEERGLT MEKIKDACEN WGFFECVNHG IPHELLDRVE KMTKEHYKKC MEDRFKESIK NRGLDSVRSE VNDVDWESTF YLKHLPASNI
101: SHVPDLDDDY RTLMKEFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KSPTFGTKVS NYPPCPKPDL IKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVIAQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE NEKKDNYPKF VFEDYMKLYS AVKFQAKEPR
301: FEAMKAMETT VANNVGPLAT A

Best Arabidopsis Sequence Match ( AT1G05010.1 )
(BLAST)

001: MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI
101: SDVPDLDDDY RTLMKDFAGK IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA GGIILLFQDD KVSGLQLLKD
201: GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE
301: PRFEAMKAME TTVANNVGPL ATA

Arabidopsis Description

ACO41-aminocyclopropane-1-carboxylate oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q06588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.