Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70340 | Canola | cytosol | 93.87 | 96.36 |
| CDX68962 | Canola | cytosol | 30.0 | 91.18 |
| CDY21655 | Canola | cytosol | 89.68 | 89.68 |
| CDX81937 | Canola | cytosol | 89.03 | 89.03 |
| AT2G19590.1 | Thale cress | cytosol | 87.74 | 87.74 |
| KRH49052 | Soybean | cytosol | 68.39 | 69.28 |
| KRH60136 | Soybean | endoplasmic reticulum | 68.06 | 68.73 |
| VIT_11s0016g02380.t01 | Wine grape | cytosol | 67.42 | 68.3 |
| KRH41426 | Soybean | cytosol | 67.1 | 67.75 |
| PGSC0003DMT400005971 | Potato | cytosol | 64.52 | 66.45 |
| Solyc07g026650.2.1 | Tomato | cytosol | 63.55 | 65.45 |
| GSMUA_Achr6P00870_001 | Banana | cytosol | 55.81 | 59.04 |
| OQU76609 | Sorghum | cytosol | 54.19 | 57.34 |
| Os06t0573900-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 39.68 | 56.94 |
| Zm00001d005927_P001 | Maize | cytosol | 41.29 | 56.64 |
| Zm00001d015860_P001 | Maize | cytosol | 42.26 | 55.98 |
| Zm00001d036955_P001 | Maize | cytosol | 52.9 | 55.97 |
| TraesCS7B01G264000.1 | Wheat | cytoskeleton, cytosol, peroxisome | 52.9 | 55.97 |
| TraesCS7A01G363900.1 | Wheat | cytoskeleton, cytosol, peroxisome | 52.9 | 55.97 |
| TraesCS7D01G359300.1 | Wheat | cytoskeleton, cytosol, peroxisome | 52.26 | 55.29 |
| HORVU7Hr1G086650.1 | Barley | cytosol | 52.26 | 55.29 |
| Zm00001d011208_P001 | Maize | cytosol | 52.9 | 51.73 |
| OQU87044 | Sorghum | cytosol | 52.58 | 50.78 |
| CDX88361 | Canola | cytosol | 13.23 | 50.62 |
| Os01t0580500-01 | Rice | cytosol | 49.03 | 48.72 |
| GSMUA_Achr5P09690_001 | Banana | cytosol | 53.87 | 48.69 |
| TraesCS7B01G444900.1 | Wheat | cytosol | 49.03 | 47.8 |
| TraesCS7D01G516200.1 | Wheat | cytosol | 48.71 | 47.48 |
| CDY34603 | Canola | cytosol | 49.03 | 47.35 |
| CDY66260 | Canola | cytosol | 48.71 | 47.04 |
| CDY19546 | Canola | cytosol | 48.39 | 46.88 |
| CDY12944 | Canola | cytosol | 48.39 | 46.88 |
| CDY32039 | Canola | cytosol | 48.06 | 46.56 |
| HORVU7Hr1G116830.1 | Barley | cytosol | 47.74 | 46.54 |
| CDY18281 | Canola | cytosol | 48.06 | 46.42 |
| CDX88360 | Canola | cytosol | 14.19 | 46.32 |
| CDY08654 | Canola | cytosol | 47.74 | 46.25 |
| CDY53397 | Canola | cytosol | 47.74 | 46.11 |
| CDY38352 | Canola | cytosol | 45.81 | 46.1 |
| CDY40884 | Canola | cytoskeleton, cytosol, peroxisome | 45.16 | 45.6 |
| CDX88362 | Canola | cytoskeleton, cytosol, peroxisome | 41.29 | 45.07 |
| CDY72562 | Canola | cytosol | 33.87 | 44.87 |
| CDX87524 | Canola | cytoskeleton, cytosol, peroxisome | 45.48 | 44.62 |
Protein Annotations
| MapMan:11.5.1.2 | Gene3D:2.60.120.330 | GO:A0A078J3E5 | UniProt:A0A078J3E5 | EnsemblPlants:CDY58326 | ProteinID:CDY58326 |
| ProteinID:CDY58326.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00023462001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF103 | SUPFAM:SSF51197 | UniParc:UPI0004EB1702 | : | : |
Description
BnaCnng33000DBnaCnng33000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3E5]
Coordinates
chrLK033658:-:39693..40947
Molecular Weight (calculated)
35285.3 Da
IEP (calculated)
6.356
GRAVY (calculated)
-0.498
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLIKEKEME IPVIDFSELD GENRTKTMSL LDHACDKWGF FMVDNHGIDK ELMDKVKKLI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESTFFVWHK
101: PTSNISKVPN ISDELIKTMD EYVSQLHKFA ERLSKLMCEN LGLPQEHIMN AFSGLEGPVF GTKVAKYPEC PRPELIRGLR EHTDAGGIIL LLQDDQVPGL
201: EFLKDGKWVP VPPSKNNTIF VNTGDQVEIL SNGKYKSVVH RVMTMKQGSR LSIATFYNPA GDAIISPAQE MLYPSGYRFQ DYLKLYSTTK FGDKGSRFHT
301: TKKMENGDSV
101: PTSNISKVPN ISDELIKTMD EYVSQLHKFA ERLSKLMCEN LGLPQEHIMN AFSGLEGPVF GTKVAKYPEC PRPELIRGLR EHTDAGGIIL LLQDDQVPGL
201: EFLKDGKWVP VPPSKNNTIF VNTGDQVEIL SNGKYKSVVH RVMTMKQGSR LSIATFYNPA GDAIISPAQE MLYPSGYRFQ DYLKLYSTTK FGDKGSRFHT
301: TKKMENGDSV
001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA
Arabidopsis Description
ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.