Factsheet for TraesCS7D01G359300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	98.29	98.29
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	97.61	97.61
HORVU7Hr1G086650.1	Barley	cytosol	94.54	94.54
OQU76609	Sorghum	cytosol	82.94	82.94
Zm00001d036955_P001	Maize	cytosol	79.18	79.18
Zm00001d015860_P001	Maize	cytosol	62.8	78.63
Os06t0573900-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	57.34	77.78
Zm00001d005927_P001	Maize	cytosol	59.39	76.99
GSMUA_Achr6P00870_001	Banana	cytosol	64.16	64.16
VIT_11s0016g02380.t01	Wine grape	cytosol	59.04	56.54
PGSC0003DMT400005971	Potato	cytosol	56.31	54.82
KRH49052	Soybean	cytosol	57.0	54.58
CDY70340	Canola	cytosol	55.63	53.97
Solyc07g026650.2.1	Tomato	cytosol	55.29	53.82
KRH60136	Soybean	endoplasmic reticulum	56.31	53.75
AT2G19590.1	Thale cress	cytosol	56.31	53.23
KRH41426	Soybean	cytosol	55.63	53.09
Bra031090.1-P	Field mustard	cytosol	53.92	52.32
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	55.29	52.26
CDX81937	Canola	cytosol	54.95	51.94
CDY21655	Canola	cytosol	54.27	51.29
TraesCS7D01G516200.1	Wheat	cytosol	50.51	46.54
TraesCS5D01G241000.1	Wheat	cytosol	47.78	44.16
TraesCS5D01G241100.1	Wheat	cytosol	47.78	43.89
TraesCS1D01G098100.1	Wheat	cytosol	45.05	42.86
TraesCS6D01G305400.1	Wheat	cytosol	47.78	42.3
TraesCS1D01G098000.1	Wheat	cytosol	44.37	42.21
TraesCS6D01G305200.1	Wheat	cytosol	47.44	41.99
TraesCS4D01G095500.1	Wheat	cytosol	43.69	40.51
TraesCS6D01G305100.2	Wheat	cytosol, peroxisome, plastid	46.42	38.42
CDX68962	Canola	cytosol	12.29	35.29

Protein Annotations

EnsemblPlants:TraesCS7D01G359300.1	EnsemblPlantsGene:TraesCS7D01G359300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF103	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:11.5.1.2	:	:	:

Description

No Description!

Coordinates

chr7D:+:461774108..461775472

Molecular Weight (calculated)

33572.2 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.394

Length

293 amino acids

Sequence
(BLAST)

001: MEIPVIKMDE LHGEKRSETL SLLHDACAQW GFFWLENHGI NDDLMDRTKE LVNKHYEQNM ENNFYSSEIA KTIGPDKVTS NVDWECSFMY HHQPKSNIHD
101: IPELLRTKVP EYAEEVVKLA EQLAEVMSEN LGLDKDYLKK AFTKPSIGIK VAKYPRCSHP EVVMGLRGHT DAGGIILLFQ DDLVPGLQFM KDGRWISIPP
201: TKGNRIFVNL GDQIEVISNG IYKSICHQVV PNQNGSRLSI ATFYNPGADV IIFPAPNLTY PSQYRFQDYL NFYSATKFTD KVSRFQTTKM VFK

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.