Factsheet for Solyc07g026650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005971	Potato	cytosol	96.01	96.01
VIT_11s0016g02380.t01	Wine grape	cytosol	71.76	70.59
KRH49052	Soybean	cytosol	68.77	67.65
KRH60136	Soybean	endoplasmic reticulum	68.77	67.43
KRH41426	Soybean	cytosol	67.44	66.12
CDY70340	Canola	cytosol	65.45	65.23
Bra031090.1-P	Field mustard	cytosol	64.12	63.91
AT2G19590.1	Thale cress	cytosol	65.78	63.87
CDY58326	Canola	cytoskeleton, cytosol, peroxisome	65.45	63.55
CDX81937	Canola	cytosol	65.12	63.23
CDY21655	Canola	cytosol	64.78	62.9
GSMUA_Achr6P00870_001	Banana	cytosol	57.48	59.04
OQU76609	Sorghum	cytosol	56.15	57.68
Zm00001d005927_P001	Maize	cytosol	42.86	57.08
Zm00001d015860_P001	Maize	cytosol	43.85	56.41
TraesCS7B01G264000.1	Wheat	cytoskeleton, cytosol, peroxisome	54.49	55.97
Zm00001d036955_P001	Maize	cytosol	54.49	55.97
TraesCS7A01G363900.1	Wheat	cytoskeleton, cytosol, peroxisome	54.15	55.63
TraesCS7D01G359300.1	Wheat	cytoskeleton, cytosol, peroxisome	53.82	55.29
HORVU7Hr1G086650.1	Barley	cytosol	53.16	54.61
Os06t0573900-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	37.87	52.78
Zm00001d011208_P001	Maize	cytosol	51.16	48.58
Solyc02g081190.2.1	Tomato	cytosol	51.16	48.12
CDX68962	Canola	cytosol	16.28	48.04
GSMUA_Achr5P09690_001	Banana	cytosol	54.49	47.81
Solyc12g005940.1.1	Tomato	cytosol	50.17	47.78
OQU87044	Sorghum	cytosol	50.83	47.66
Solyc07g049530.2.1	Tomato	nucleus	49.5	47.3
TraesCS7D01G516200.1	Wheat	cytosol	49.83	47.17
Os01t0580500-01	Rice	cytosol	48.84	47.12
TraesCS7B01G444900.1	Wheat	cytosol	49.5	46.86
Solyc07g049550.2.1	Tomato	nucleus	49.17	46.84
Solyc02g036350.2.1	Tomato	extracellular	49.17	46.4
HORVU7Hr1G116830.1	Barley	cytosol	48.84	46.23
Solyc06g060070.2.1	Tomato	cytosol	44.52	42.68

Protein Annotations

MapMan:11.5.1.2	Gene3D:2.60.120.330	EMBL:AJ715790	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009815	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF103	UniProt:Q6A1K7
SUPFAM:SSF51197	EnsemblPlantsGene:Solyc07g026650.2	EnsemblPlants:Solyc07g026650.2.1	UniParc:UPI00003FF7C4	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase 1 [Source:Projected from Arabidopsis thaliana (AT2G19590) UniProtKB/Swiss-Prot;Acc:Q9ZUN4]

Coordinates

chr7:-:30139957..30141385

Molecular Weight (calculated)

34386.2 Da

IEP (calculated)

6.600

GRAVY (calculated)

-0.412

Length

301 amino acids

Sequence
(BLAST)

001: MEMPVIDFSK LEGEERCATM SLLHQACEKW GFFMIENHGI DSYLMDNVKQ FVNQHYEANM KKRFYESELP MSLEKNGNIS NTDWESTFFV WHRPASNIYE
101: IQGLSKELCK AVDDYIDQLI KLAENLSELM CENLGLAKSY IKEAFSGSKG PSVGTKVAIY PQCPRPDLVR GLREHTDAGG IILLLQDEQV PGLEFFKDGH
201: WVNIPPSKNN RLFVNIGDQI EILTNGMYKS IRHRVMAEKD GNRLSIATFY NPAGEAIISP ASKLLYPCHL RFQDYLNLYS KTKFAEKGPR FESAKRLANG
301: H

Best Arabidopsis Sequence Match ( AT2G19590.1 )
(BLAST)

001: MVLIKEREME IPVIDFAELD GEKRSKTMSL LDHACDKWGF FMVDNHGIDK ELMEKVKKMI NSHYEEHLKE KFYQSEMVKA LSEGKTSDAD WESSFFISHK
101: PTSNICQIPN ISEELSKTMD EYVCQLHKFA ERLSKLMCEN LGLDQEDIMN AFSGPKGPAF GTKVAKYPEC PRPELMRGLR EHTDAGGIIL LLQDDQVPGL
201: EFFKDGKWVP IPPSKNNTIF VNTGDQLEIL SNGRYKSVVH RVMTVKHGSR LSIATFYNPA GDAIISPAPK LLYPSGYRFQ DYLKLYSTTK FGDKGPRLET
301: MKKMGNADSA

Arabidopsis Description

ACO11-aminocyclopropane-1-carboxylate oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.